Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1234 ATGAACAACACTTCAAATCCTGATGACCCTTCTGAGGACCTAAATGGTTATGCATATTATTCTGTCGGATTATCTCTTGGCTTTCTCCTCTTGATGACCTTTATAGCTCTCACTGCATATTACTGTAGCCAAAGAAGCGTGCAAAACAGGCAAAGTGAACCGAGTGCTAGCAGCAACAACAGCAGTTCTAACAGGACAGTGATCATGGAAAGAGATTCTGCTATAACTATACAACTCGGTGAGGAACAACAAGAAGCTGTCCTGAACAGTTATCCTGTGCTGTTGTTCTCCCAAGCAAAGCTTCACAAGCCTGATTCAACAGCACTCAGCTGTTCCATATGCTTGGCAGATTACAAGGACTCAGAGTGGTTGAGGCTATTGCCTGACTGTGGTCACTTCTTTCATAGGGACTGCATTGACATGTGGTTGAGGCTAAACCTGTCATGTCCAATGTGTAGGAACTCCCCATTCACAACCCCTCTTCAAACTCCCCTTGCTGAGGTTGCTCCCTTGGCTGCAAGATGA 525 0.4533 MNNTSNPDDPSEDLNGYAYYSVGLSLGFLLLMTFIALTAYYCSQRSVQNRQSEPSASSNNSSSNRTVIMERDSAITIQLGEEQQEAVLNSYPVLLFSQAKLHKPDSTALSCSICLADYKDSEWLRLLPDCGHFFHRDCIDMWLRLNLSCPMCRNSPFTTPLQTPLAEVAPLAAR* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1234 174 Pfam Ring finger domain 110 153 IPR001841 -
Dod06g1234 174 ProSiteProfiles Zinc finger RING-type profile. 111 153 IPR001841 -
Dod06g1234 174 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 70 157 IPR013083 -
Dod06g1234 174 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 1 170 - -
Dod06g1234 174 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 170 IPR045899 -
Dod06g1234 174 SUPERFAMILY RING/U-box 87 158 - -
Dod06g1234 174 SMART ring_2 111 152 IPR001841 -
Dod06g1234 174 CDD RING-H2_PA-TM-RING 111 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1234 Dod-Chr6 16461643 16462469 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1234 11 173 C3H Transcription Factor Family AT2G35910 46.012 1.86e-37 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1234 - - adu:107466513 238.424