Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1201 ATGTCAGGAGCGGAAATTTGGCCATCCATTGAAGAGGAGTCTAGTAAGCCTCTTCCTCCATTTGATAGCAGGAGTGGCTATGATTCAAGGACTGGCATTTATCACTCTCTTGTTAGACTTGGCACCAAGCATGAAATCCCAACAAGGCTTGATCTTAATGCTGCCCATCTTGTGTTATCACAGTTCCCACAAGGGGCCCTTGCTGAGGCAACAACAGCATACATTGATGCAGGTACTACTAAGAGCTTGAGCTATGGCGAGCTTCGCCGGTCTATATACTCCCTTGCATCGGCTTTGTTCCATGGACTTGAGGTTAGGAAAGGGGATGTGGTGTTTGTCCTGTCCCCAAACTCAATCTTGTTCCCAACCATATGCCTAGCTGTGTTATCAGTTGGTGCAGTGCTCACAACTGCCAACCCACTTAATACTGAGTCAGAAATTGCCAAACAAGTAAGAGACTCAGATGCTAAACTAGCCATCTCAGCACCAGAGGAGCTGCACAAATTGGTCCCAACTGGGGTGCCTACAATTCTCACCGATCGTCCATCCGATGGCCAGATGTTATCAGTTGAAGAGTTGATAGAAGGCTGCTCTTGTTCTCTAGAGTTGCCACAGGTTCCTGTGGCTCAATCAGACACTGCTGCTATACTTTACTCCTCAGGGACTACTGGGGTAAGCAAAGGTGTAGTTTTGACACACAAGAATCTCATTTCCATAATGAGACTCCTCTTTTGGTCTGCTGATGTAACTGCATCTCAGGATGATGTTTTCTTGGCCTTCATTCCAATGTTTCACATCTATGGACTGATATTCTTTGGATTAGGATTGTTGTGTGTTGGGGTCACAACAATTGTGATGCAGAAATTCGACTTCCAAGCTATGCTCGTCGCGATCCAGAAGTACAAAGTTAATAACTTACCAGCAGTGCCACCAGTGATCCTTGCACTAGTGAAATATGCAAGCAAAGCAGGGTGTGACTTGTCCGGCCTCAAAAGAGTGGGATCAGGTGCTGCACCTTTGAGCAAGGAAGTGGCACAGGAGTTTAGGAAGATGTTTCCTTGGGTTGAACTAAGGCAAGGTTATGGCCTAACTGAAAGTGGGGCTGCAGCAACCTTTTTTGTATCAGATAAAGATGCTAAAGCTCATCTAGACTCGTGTGGGAAGCTACTTCCGACCTTTTGTGCAAAAGTGGTAGACATTGAAACCGGGAAGCCTTTGCCTCCTAAAAAGGAAGGAGAGTTGTGGCTGAAGAGTCCTACTATTATGAAAGGGTATCTGGGAAATTTGGAGGCAACAACTGCAACAGTTGATTCAGAAGGGTGGTTGAAGACAGGTGATCTTGGTTATATTGATGAGAATGGATTTGTTTATGTAGTTGAAAGAATAAAGGAGCTGATCAAGCACAAGGGATATCAGGTGGCTCCTGCAGAACTGGAATCTTTATTACTAAGTCATCCCCTTATTGTTGATGCAGCAGTTATACCGTTTGAAGATGAAGAAACTGGACAGATACCAATGGCATATGTTGTGAAAGGAGCTGGTTCTGATGAACTCTCAGAAGACCAAGTCATTCAATTTGTTGCAGGCCAGGTGGCTCCATATAAGAAAGTGAGAAGGGTGAGTTTCATTAAGGCCATTCCAAGGTCAGCTGCTGGCAAGATATTGCGCAAGGATCTTGTATCTCAAAGCAAACAACAACTTGTATCCAAGTTATGA 1716 0.4481 MSGAEIWPSIEEESSKPLPPFDSRSGYDSRTGIYHSLVRLGTKHEIPTRLDLNAAHLVLSQFPQGALAEATTAYIDAGTTKSLSYGELRRSIYSLASALFHGLEVRKGDVVFVLSPNSILFPTICLAVLSVGAVLTTANPLNTESEIAKQVRDSDAKLAISAPEELHKLVPTGVPTILTDRPSDGQMLSVEELIEGCSCSLELPQVPVAQSDTAAILYSSGTTGVSKGVVLTHKNLISIMRLLFWSADVTASQDDVFLAFIPMFHIYGLIFFGLGLLCVGVTTIVMQKFDFQAMLVAIQKYKVNNLPAVPPVILALVKYASKAGCDLSGLKRVGSGAAPLSKEVAQEFRKMFPWVELRQGYGLTESGAAATFFVSDKDAKAHLDSCGKLLPTFCAKVVDIETGKPLPPKKEGELWLKSPTIMKGYLGNLEATTATVDSEGWLKTGDLGYIDENGFVYVVERIKELIKHKGYQVAPAELESLLLSHPLIVDAAVIPFEDEETGQIPMAYVVKGAGSDELSEDQVIQFVAGQVAPYKKVRRVSFIKAIPRSAAGKILRKDLVSQSKQQLVSKL* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1201 571 MobiDBLite consensus disorder prediction 1 24 - -
Dod06g1201 571 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 19 570 - -
Dod06g1201 571 Gene3D - 43 463 IPR042099 -
Dod06g1201 571 ProSitePatterns Putative AMP-binding domain signature. 216 227 IPR020845 -
Dod06g1201 571 SUPERFAMILY Acetyl-CoA synthetase-like 70 563 - -
Dod06g1201 571 Pfam AMP-binding enzyme C-terminal domain 477 553 IPR025110 -
Dod06g1201 571 PANTHER AMP-DEPENDENT SYNTHETASE AND LIGASE FAMILY PROTEIN-RELATED 19 570 - -
Dod06g1201 571 Pfam AMP-binding enzyme 71 467 IPR000873 -
Dod06g1201 571 CDD 4CL 46 559 - -
Dod06g1201 571 Gene3D - 464 569 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1201 Dod-Chr6 16108133 16115069 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1201 28 567 Monolignol Biosynthesis Gene Families AT1G20500 44.846 6.79e-157 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1201 K10526 - gmx:100783104 922.539
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g1201 06 16108133 16115069 Dod06g1201 06 16108133 16115069 ECH