Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod06g1192 | ATGACAGATTTTCAGCCGCTACAGCAGAAGCCTGAGCCTGCTGATACCCGCGCTGATTTTGAGCGTGGATTGGAGGAGTTCATGCGTGGGCACTTGGATGATTGTATGTCATTCGCATCATGTAGCTCCTCCAGGGCACAGGATGATGAGGATGATGAGGGTGATCAGCTTGTTAGGAGGAGGCGGAGGTCTGATCTTGAAGGAGATGATTTGGCAGAGTCATCTGCTGCTCGGAGGCGCCACTCGCGCATTTTGAGTAGGTGGGCTGCCCGGCAGGCTCAGGAGATGATAACTACAATTGAGAGGAGGAACCGGGAGTCTGAGTTGATGGCACTTGCAGGATTGCACACTGTGTCCATGTTGGACTCCTCTTTTTTGAGGGGATCACAGTCCCCTACTTCTGGACAGGAGGGGGCTGTAGAGAGGCCGAGCACTCAGGCATCTGCCATTCTGCAGATGTGGCGTGAATTGGAGGATGAGCATTTGTTGAATCGGGCTCGTGGAAGGATGAGGGAAAGGTTGCGGCAGCAAAGGAGTTCTGAGTCTATTACCAATGTGTCAAGTACCATGTCTGATAGTCGAGGTAGTGAGAATCAAGGGAGCTTGGGGGATGTGAGTGAAAGTGAAAATGATTTTGGTACTTGGTCACATGATCAGGTTGGATCGCGGAATGCACATGGGGATCATAATGGGTCTAGCAGGGAGCAATCTCCTGATCTTGGCGAAGTCGAGAGGGAGAGGGTTAGACAGATTGTTCGGGGATGGATGGAAAGTGGTATTAGTGATCATTCATCTAATGTGAGTCAGAGAAACAACAGCCGTAGAGCAGAATGGCTTGGAGAGACAGAGCGTGAGAGGGTAAGGATTGTCAGGGAATGGGTGCAAATGACTAGCCAGCAGAGAGGTTCACGTGGGAGCTGGAGGGATGCTCAAGTAAGTGAAGGTGCTCAAGTTGATCAAACCCGTGATGTGGTAGCTGATCATGATGAGGGCCAGCCAGAGCATGTCCGGAGGGACATGTTGAGGTTGCGCGGAAGACAGGCTCTAGTTGATTTGCTTGTGAGGATAGAAAGGGAAAGACAAAGAGAGCTGCAGGGATTGTTGGAGCACCGAGCTGTATCTGATTTTGCTCACCGCAACCGCATCCAGTCACTGCTCAGAGGTAGATTCCTCCGAAATGAAAGAACTGTTGAAGATGAGAGGCCTCCGTCTATGGCTGCTGGTGAATTGGTTCAGTTGAGACAACGGCACACAGTCTCTGGTTTAAGGGAGGGGTTTCGCTCAAGATTGGAAAACATTGTTCGTGGTCAAGCAGGTACCAGTCCTGATGCCACATCAAATAATAATATTAGTGAAACAAGAAGTGATGGGAACCAAGCAAACAATCTGTTGGATGCCCAACAAGAAAATTATGAACAAGAGCAGATTAGGAGTCTGGAAACTGATGTGCGTCAGTTGCCAAATCAAACAGGAACTTTGGAGAGTAGCACAAGTGAGAGTATTAGTTGGCAAGAAGCTAGTAATCAGGCAGCGAATCGGCAGGAACAGATTACTGAAGATGCAGGAGGAAACTGGCAGCAGAGGACTTATGTTCCATTCAATCAATCAAGAGATGGAACGGCAGACGGTGATTGGCCACAGGAAACTCCGACAAATTTATCTCGGGCAGGCCCTCATCCACAAGAATCTCAAAGAATTTGGGATGAGAATAGCCCAAGGGAAGCTGTTGGTAATTGGTCTGAAGGACCTTCCGGAACTTCAAGGAATCGTCGTGGTGTTCCATTTGGAAGATTCAATAGATTCCATCCACCTGATGATGATAATGTGTACAGTATGGAGCTTAGAGAGCTTCTTAGCAGGAGAAGTGTTTCTAATCTTCTTCGCAGCGGTTTCCGTGAAAGTCTTGATCAACTAATTCAGTCGTATGTGGAAAGGCAAGGTCGTGCGCCGATTGACTGGGATTTGCATAGGAATTTGCCACCACCAACTCCTGCCTCACCTGAGCAGGACCCTGATCAGCAGCGTGATGAACGTAATGAAGGTCAGCATGAAGCCATAAACAGACCTTCACTGGTGTTGCCTTCTCCGCCAGTACCTCCACCACAGCCACTGTGGCACCAGGATTTGCATCAAACTGGGTGGTCTCGCCACAGCATGCATCGTTCTGAAATCGAATGGGAGATAATGAATGATCTAAGATCAGACATGGCAAGACTTCAGCAAGGGATGAATCACATGCAGAGGATGTTGGAGGCATGCATGGATATGCAGCTGGAGTTGCAGCGCTCTGTTAGACAGGAAGTCTCTGCTGCACTGAATCGCTCAGCTGGTGAAAATGGCTTGGGTGCTGAGACATCTGATGATGGATCTAAATGGGGGCATGTGAAAAAAGGAACTTGCTGTGTTTGTTGTGATAACCATATTGATTCACTTTTGTACAGATGCGGGCACATGTGCACTTGTTCAAAATGTGCCAATGAGTTAGTTCGCGGTGGCGGTAAGTGTCCTTTATGCCGAGCACCGATTGTTGAGGTGGTCCGAGCATATTCCATACTGTAA | 2559 | 0.4873 | MTDFQPLQQKPEPADTRADFERGLEEFMRGHLDDCMSFASCSSSRAQDDEDDEGDQLVRRRRRSDLEGDDLAESSAARRRHSRILSRWAARQAQEMITTIERRNRESELMALAGLHTVSMLDSSFLRGSQSPTSGQEGAVERPSTQASAILQMWRELEDEHLLNRARGRMRERLRQQRSSESITNVSSTMSDSRGSENQGSLGDVSESENDFGTWSHDQVGSRNAHGDHNGSSREQSPDLGEVERERVRQIVRGWMESGISDHSSNVSQRNNSRRAEWLGETERERVRIVREWVQMTSQQRGSRGSWRDAQVSEGAQVDQTRDVVADHDEGQPEHVRRDMLRLRGRQALVDLLVRIERERQRELQGLLEHRAVSDFAHRNRIQSLLRGRFLRNERTVEDERPPSMAAGELVQLRQRHTVSGLREGFRSRLENIVRGQAGTSPDATSNNNISETRSDGNQANNLLDAQQENYEQEQIRSLETDVRQLPNQTGTLESSTSESISWQEASNQAANRQEQITEDAGGNWQQRTYVPFNQSRDGTADGDWPQETPTNLSRAGPHPQESQRIWDENSPREAVGNWSEGPSGTSRNRRGVPFGRFNRFHPPDDDNVYSMELRELLSRRSVSNLLRSGFRESLDQLIQSYVERQGRAPIDWDLHRNLPPPTPASPEQDPDQQRDERNEGQHEAINRPSLVLPSPPVPPPQPLWHQDLHQTGWSRHSMHRSEIEWEIMNDLRSDMARLQQGMNHMQRMLEACMDMQLELQRSVRQEVSAALNRSAGENGLGAETSDDGSKWGHVKKGTCCVCCDNHIDSLLYRCGHMCTCSKCANELVRGGGKCPLCRAPIVEVVRAYSIL* | 853 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod06g1192 | 852 | MobiDBLite | consensus disorder prediction | 652 | 698 | - | - | |
Dod06g1192 | 852 | MobiDBLite | consensus disorder prediction | 52 | 78 | - | - | |
Dod06g1192 | 852 | Coils | Coil | 729 | 749 | - | - | |
Dod06g1192 | 852 | MobiDBLite | consensus disorder prediction | 433 | 458 | - | - | |
Dod06g1192 | 852 | MobiDBLite | consensus disorder prediction | 434 | 458 | - | - | |
Dod06g1192 | 852 | MobiDBLite | consensus disorder prediction | 41 | 78 | - | - | |
Dod06g1192 | 852 | CDD | mRING-HC-C3HC5_NEU1 | 799 | 839 | - | - | |
Dod06g1192 | 852 | PANTHER | RING/U-BOX SUPERFAMILY PROTEIN | 1 | 852 | - | - | |
Dod06g1192 | 852 | MobiDBLite | consensus disorder prediction | 670 | 684 | - | - | |
Dod06g1192 | 852 | MobiDBLite | consensus disorder prediction | 168 | 244 | - | - | |
Dod06g1192 | 852 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 784 | 850 | IPR013083 | - | |
Dod06g1192 | 852 | Pfam | Zinc finger, C3HC4 type (RING finger) | 797 | 844 | - | - | |
Dod06g1192 | 852 | MobiDBLite | consensus disorder prediction | 482 | 595 | - | - | |
Dod06g1192 | 852 | SUPERFAMILY | RING/U-box | 799 | 845 | - | - | |
Dod06g1192 | 852 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Dod06g1192 | 852 | PANTHER | ZINC FINGER, RING/FYVE/PHD-TYPE-RELATED | 1 | 852 | - | - | |
Dod06g1192 | 852 | ProSiteProfiles | Zinc finger RING-type profile. | 800 | 839 | IPR001841 | - | |
Dod06g1192 | 852 | MobiDBLite | consensus disorder prediction | 222 | 244 | - | - | |
Dod06g1192 | 852 | MobiDBLite | consensus disorder prediction | 179 | 221 | - | - | |
Dod06g1192 | 852 | MobiDBLite | consensus disorder prediction | 482 | 559 | - | - | |
Dod06g1192 | 852 | MobiDBLite | consensus disorder prediction | 125 | 146 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod06g1192 | Dod-Chr6 | 16031459 | 16037913 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod06g1192 | 800 | 846 | C3H Transcription Factor Family | AT3G06140 | 42.553 | 1.37e-06 | 49.7 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod06g1192 | - | - | gmx:100784174 | 1475.69 |