Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1192 ATGACAGATTTTCAGCCGCTACAGCAGAAGCCTGAGCCTGCTGATACCCGCGCTGATTTTGAGCGTGGATTGGAGGAGTTCATGCGTGGGCACTTGGATGATTGTATGTCATTCGCATCATGTAGCTCCTCCAGGGCACAGGATGATGAGGATGATGAGGGTGATCAGCTTGTTAGGAGGAGGCGGAGGTCTGATCTTGAAGGAGATGATTTGGCAGAGTCATCTGCTGCTCGGAGGCGCCACTCGCGCATTTTGAGTAGGTGGGCTGCCCGGCAGGCTCAGGAGATGATAACTACAATTGAGAGGAGGAACCGGGAGTCTGAGTTGATGGCACTTGCAGGATTGCACACTGTGTCCATGTTGGACTCCTCTTTTTTGAGGGGATCACAGTCCCCTACTTCTGGACAGGAGGGGGCTGTAGAGAGGCCGAGCACTCAGGCATCTGCCATTCTGCAGATGTGGCGTGAATTGGAGGATGAGCATTTGTTGAATCGGGCTCGTGGAAGGATGAGGGAAAGGTTGCGGCAGCAAAGGAGTTCTGAGTCTATTACCAATGTGTCAAGTACCATGTCTGATAGTCGAGGTAGTGAGAATCAAGGGAGCTTGGGGGATGTGAGTGAAAGTGAAAATGATTTTGGTACTTGGTCACATGATCAGGTTGGATCGCGGAATGCACATGGGGATCATAATGGGTCTAGCAGGGAGCAATCTCCTGATCTTGGCGAAGTCGAGAGGGAGAGGGTTAGACAGATTGTTCGGGGATGGATGGAAAGTGGTATTAGTGATCATTCATCTAATGTGAGTCAGAGAAACAACAGCCGTAGAGCAGAATGGCTTGGAGAGACAGAGCGTGAGAGGGTAAGGATTGTCAGGGAATGGGTGCAAATGACTAGCCAGCAGAGAGGTTCACGTGGGAGCTGGAGGGATGCTCAAGTAAGTGAAGGTGCTCAAGTTGATCAAACCCGTGATGTGGTAGCTGATCATGATGAGGGCCAGCCAGAGCATGTCCGGAGGGACATGTTGAGGTTGCGCGGAAGACAGGCTCTAGTTGATTTGCTTGTGAGGATAGAAAGGGAAAGACAAAGAGAGCTGCAGGGATTGTTGGAGCACCGAGCTGTATCTGATTTTGCTCACCGCAACCGCATCCAGTCACTGCTCAGAGGTAGATTCCTCCGAAATGAAAGAACTGTTGAAGATGAGAGGCCTCCGTCTATGGCTGCTGGTGAATTGGTTCAGTTGAGACAACGGCACACAGTCTCTGGTTTAAGGGAGGGGTTTCGCTCAAGATTGGAAAACATTGTTCGTGGTCAAGCAGGTACCAGTCCTGATGCCACATCAAATAATAATATTAGTGAAACAAGAAGTGATGGGAACCAAGCAAACAATCTGTTGGATGCCCAACAAGAAAATTATGAACAAGAGCAGATTAGGAGTCTGGAAACTGATGTGCGTCAGTTGCCAAATCAAACAGGAACTTTGGAGAGTAGCACAAGTGAGAGTATTAGTTGGCAAGAAGCTAGTAATCAGGCAGCGAATCGGCAGGAACAGATTACTGAAGATGCAGGAGGAAACTGGCAGCAGAGGACTTATGTTCCATTCAATCAATCAAGAGATGGAACGGCAGACGGTGATTGGCCACAGGAAACTCCGACAAATTTATCTCGGGCAGGCCCTCATCCACAAGAATCTCAAAGAATTTGGGATGAGAATAGCCCAAGGGAAGCTGTTGGTAATTGGTCTGAAGGACCTTCCGGAACTTCAAGGAATCGTCGTGGTGTTCCATTTGGAAGATTCAATAGATTCCATCCACCTGATGATGATAATGTGTACAGTATGGAGCTTAGAGAGCTTCTTAGCAGGAGAAGTGTTTCTAATCTTCTTCGCAGCGGTTTCCGTGAAAGTCTTGATCAACTAATTCAGTCGTATGTGGAAAGGCAAGGTCGTGCGCCGATTGACTGGGATTTGCATAGGAATTTGCCACCACCAACTCCTGCCTCACCTGAGCAGGACCCTGATCAGCAGCGTGATGAACGTAATGAAGGTCAGCATGAAGCCATAAACAGACCTTCACTGGTGTTGCCTTCTCCGCCAGTACCTCCACCACAGCCACTGTGGCACCAGGATTTGCATCAAACTGGGTGGTCTCGCCACAGCATGCATCGTTCTGAAATCGAATGGGAGATAATGAATGATCTAAGATCAGACATGGCAAGACTTCAGCAAGGGATGAATCACATGCAGAGGATGTTGGAGGCATGCATGGATATGCAGCTGGAGTTGCAGCGCTCTGTTAGACAGGAAGTCTCTGCTGCACTGAATCGCTCAGCTGGTGAAAATGGCTTGGGTGCTGAGACATCTGATGATGGATCTAAATGGGGGCATGTGAAAAAAGGAACTTGCTGTGTTTGTTGTGATAACCATATTGATTCACTTTTGTACAGATGCGGGCACATGTGCACTTGTTCAAAATGTGCCAATGAGTTAGTTCGCGGTGGCGGTAAGTGTCCTTTATGCCGAGCACCGATTGTTGAGGTGGTCCGAGCATATTCCATACTGTAA 2559 0.4873 MTDFQPLQQKPEPADTRADFERGLEEFMRGHLDDCMSFASCSSSRAQDDEDDEGDQLVRRRRRSDLEGDDLAESSAARRRHSRILSRWAARQAQEMITTIERRNRESELMALAGLHTVSMLDSSFLRGSQSPTSGQEGAVERPSTQASAILQMWRELEDEHLLNRARGRMRERLRQQRSSESITNVSSTMSDSRGSENQGSLGDVSESENDFGTWSHDQVGSRNAHGDHNGSSREQSPDLGEVERERVRQIVRGWMESGISDHSSNVSQRNNSRRAEWLGETERERVRIVREWVQMTSQQRGSRGSWRDAQVSEGAQVDQTRDVVADHDEGQPEHVRRDMLRLRGRQALVDLLVRIERERQRELQGLLEHRAVSDFAHRNRIQSLLRGRFLRNERTVEDERPPSMAAGELVQLRQRHTVSGLREGFRSRLENIVRGQAGTSPDATSNNNISETRSDGNQANNLLDAQQENYEQEQIRSLETDVRQLPNQTGTLESSTSESISWQEASNQAANRQEQITEDAGGNWQQRTYVPFNQSRDGTADGDWPQETPTNLSRAGPHPQESQRIWDENSPREAVGNWSEGPSGTSRNRRGVPFGRFNRFHPPDDDNVYSMELRELLSRRSVSNLLRSGFRESLDQLIQSYVERQGRAPIDWDLHRNLPPPTPASPEQDPDQQRDERNEGQHEAINRPSLVLPSPPVPPPQPLWHQDLHQTGWSRHSMHRSEIEWEIMNDLRSDMARLQQGMNHMQRMLEACMDMQLELQRSVRQEVSAALNRSAGENGLGAETSDDGSKWGHVKKGTCCVCCDNHIDSLLYRCGHMCTCSKCANELVRGGGKCPLCRAPIVEVVRAYSIL* 853
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1192 852 MobiDBLite consensus disorder prediction 652 698 - -
Dod06g1192 852 MobiDBLite consensus disorder prediction 52 78 - -
Dod06g1192 852 Coils Coil 729 749 - -
Dod06g1192 852 MobiDBLite consensus disorder prediction 433 458 - -
Dod06g1192 852 MobiDBLite consensus disorder prediction 434 458 - -
Dod06g1192 852 MobiDBLite consensus disorder prediction 41 78 - -
Dod06g1192 852 CDD mRING-HC-C3HC5_NEU1 799 839 - -
Dod06g1192 852 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 852 - -
Dod06g1192 852 MobiDBLite consensus disorder prediction 670 684 - -
Dod06g1192 852 MobiDBLite consensus disorder prediction 168 244 - -
Dod06g1192 852 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 784 850 IPR013083 -
Dod06g1192 852 Pfam Zinc finger, C3HC4 type (RING finger) 797 844 - -
Dod06g1192 852 MobiDBLite consensus disorder prediction 482 595 - -
Dod06g1192 852 SUPERFAMILY RING/U-box 799 845 - -
Dod06g1192 852 MobiDBLite consensus disorder prediction 1 22 - -
Dod06g1192 852 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE-RELATED 1 852 - -
Dod06g1192 852 ProSiteProfiles Zinc finger RING-type profile. 800 839 IPR001841 -
Dod06g1192 852 MobiDBLite consensus disorder prediction 222 244 - -
Dod06g1192 852 MobiDBLite consensus disorder prediction 179 221 - -
Dod06g1192 852 MobiDBLite consensus disorder prediction 482 559 - -
Dod06g1192 852 MobiDBLite consensus disorder prediction 125 146 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dod06g1192 Dod-Chr6 16031459 16037913 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1192 800 846 C3H Transcription Factor Family AT3G06140 42.553 1.37e-06 49.7
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1192 - - gmx:100784174 1475.69