Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1175 ATGAACTGTCTTCAGAATCTTCCTCGATCCTTTGCTTTGCCCTTCCAAACAGCAACGCGCGACCACAGGAACCATCCTTTCTCTGCTGTTTCACTTGGAATCATCAATAATTCTCATCAAAATCGAAGTATGGCACTTAAGTCTGCTTCCACACCAAGCACAGAGACAAGTAGTGGCAGCATGGAGGAGGAAAAGACTGAAAAATCTGAGACATATAGTCATAACATGACAGAAGCCATGGGTGCTGTTCTGACTTATAGGCATGAATTGGGAATGAACTACAACTTCATCCGTCCAGACTTGATAGTGGGATCATGCCTACAGACTCCTGAAGATGTTGACAAGCTTCGTAGAATTGGAGTGAAAACCATTTTTTGCTTGCAACAAGATCCAGACCTAGAATATTTTGGAGTTGATATTAATGCCATACGAGAATATGCAAAGGCATGCAACGACATTCAACACTTGCGTGCTCAGATAAGGGACTTCGATGCATTTGATTTACGGATGCGTCTACCAGCTGTAGTTAGCAAATTATACAAGGCAATAAATTTCAATGGAGGTGTGACATATATACATTGTACTGCTGGGCTTGGAAGAGCTCCGGCTGTTGCGCTGGCATATATGTTTTGGGTTCAGGGCTATAAACTTAATGAGGCTCATAGACTACTCCTGAGCAAAAGATCATGCTTTCCAAAACTGGATGCCATAAAAAGTGCAACTGCTGACATTCTTACAGGCCTCAGTAAGAAGTCCGTCACGTTATCATGGGAAGACAGCAATTGCTCTTCAGTGGAAGTTTCGGGGCTTGACATTGGATGGGGGCAGAGGATCCCTCTAGATTTTGATGACAAGCAGGGTTTGTGGTTTCTCAAGAGGGAATTGCCTGAAGGGCGCTACGAGTACAAGTACATTGTTGATGGGGAATGGACATGCAGCGAGTATGAGCTTGTGACCTCACCCAACAAAGACGGCCATGTCAATAATTTTCTTGACGTCCTTGAAGATCCAAGCAGTGTTCGCGCTTCGCTTTGGGAGAGATTGACTGGCGATGATCCTGGTCTCATAAAGGATGAACGACTGAGGATAAGGGAGTTTCTCGAAGCTTATCCTGATGACGAGCAGTGA 1128 0.445 MNCLQNLPRSFALPFQTATRDHRNHPFSAVSLGIINNSHQNRSMALKSASTPSTETSSGSMEEEKTEKSETYSHNMTEAMGAVLTYRHELGMNYNFIRPDLIVGSCLQTPEDVDKLRRIGVKTIFCLQQDPDLEYFGVDINAIREYAKACNDIQHLRAQIRDFDAFDLRMRLPAVVSKLYKAINFNGGVTYIHCTAGLGRAPAVALAYMFWVQGYKLNEAHRLLLSKRSCFPKLDAIKSATADILTGLSKKSVTLSWEDSNCSSVEVSGLDIGWGQRIPLDFDDKQGLWFLKRELPEGRYEYKYIVDGEWTCSEYELVTSPNKDGHVNNFLDVLEDPSSVRASLWERLTGDDPGLIKDERLRIREFLEAYPDDEQ* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1175 375 CDD E_set_AMPKbeta_like_N 252 333 - -
Dod06g1175 375 ProSiteProfiles Dual specificity protein phosphatase domain profile. 93 250 IPR020422 GO:0006470|GO:0008138
Dod06g1175 375 CDD DSP_laforin-like 92 239 IPR045204 GO:0019203|GO:0046838
Dod06g1175 375 MobiDBLite consensus disorder prediction 43 59 - -
Dod06g1175 375 Pfam Dual specificity phosphatase, catalytic domain 136 231 IPR000340 GO:0008138|GO:0016311
Dod06g1175 375 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 90 235 IPR029021 -
Dod06g1175 375 MobiDBLite consensus disorder prediction 43 71 - -
Dod06g1175 375 Pfam Glycogen recognition site of AMP-activated protein kinase 253 335 IPR032640 -
Dod06g1175 375 SMART dsp_5 93 243 IPR020422 GO:0006470|GO:0008138
Dod06g1175 375 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 170 228 IPR000387 GO:0016311|GO:0016791
Dod06g1175 375 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 1 374 - -
Dod06g1175 375 Gene3D Protein tyrosine phosphatase superfamily 86 366 IPR029021 -
Dod06g1175 375 Gene3D Immunoglobulins 248 338 IPR013783 -
Dod06g1175 375 PANTHER PHOSPHOGLUCAN PHOSPHATASE DSP4, CHLOROPLASTIC 1 374 IPR030079 GO:0005982|GO:0007623|GO:0019203
Dod06g1175 375 SUPERFAMILY E set domains 252 333 IPR014756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1175 Dod-Chr6 15884904 15894678 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1175 92 374 Protein tyrosine phosphatase (PTP) family AT3G52180 71.025 3.29e-155 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1175 - - gmx:100804010 608.986