LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod06g1168	ATGTTGGAAATGGAGAAGGATTTTGATTCAAAGTTGAAGATTCAGGGGAATTCTTCCTCCTCTTCCAATGGTGGTGGGAATGTCCAGAGATCCAAGAGCTTTGCTTTTAGGGCTCCTCAGGAGAATTACACCATTCAGGACTTTGAGCTTGGCAAGATCTATGGTGTTGGCTCTTATTCTAAGGTTGTAAGGGCCAAGAAGAAGGACACAGGAACTGTGTATGCGATGAAGATCATGGATAAAAAATTTATTACTAAGGAGAACAAAACAGCTTATGTGAAGCTGGAACGCATTGTGCTTGATCAATTGGATCATCCTGGCATTGTGCGGCTATATTTCACATTTCAAGACACATTTTCTCTGTACATGGCACTTGAATCCTGTGAAGGTGGAGAACTTTTTGATCAAATAACCAGGAAAGGTCGTCTAACTGAGGATGAGGCACAATTCTATGCAGCTGAAGTTGTGGATGCTCTTGAATACATACATAATTTGGGATTGATACATCGTGATATAAAGCCAGAGAACCTATTGCTTACAGCTGATGGACATATCAAAATAGCCGATTTTGGGAGTGTGAAGCCTATGCAGGACAGTAAAATCACTGTCCTTCCAAATGCAGCATCAGATGACAAAGCCTGCACATTTGTGGGAACAGCTGCTTATGTCCCTCCAGAGGTTCTCAATTCTTCTCCGGCAACTTTTGGAAATGACCTCTGGGCACTAGGATGTACATTATACCAAATGCTCTCTGGAACTTCCCCTTTTAAAGATGCAAGTGAGTGGCTAATATTCCAAAGAATTATAGCAAGAGAAATTCGATTTCCTGATTACTTTTCTGATGAAGCAAGGGACCTCATTGACCGGCTGCTGGATTTGGACCCCAGCAGGAGACCAGGTGCAGGACCCGATGGTTATGCTGCTTTAAAAAGGAACCCCTTTTTTAAGGGTGTTGACTGGAATAACTTGAGGGCACAAGTTCCCCCAAAACTTGCTCTGGAACAAGGGACGCAGTCTCCTGTGGTTGATGATTCTCAGGACTCATCATGGAGTCCCTCTCACATTGGGGATGGTTATGCAGCTTCTGCTAGACAACCTGACGGTGCTACATCATCTTCTGAGGGGACTGCTCACATAACCAGGCTAGCATCAATTGATTCCTTTGATTCAAAATGGCAACAATTTTTGGATCCTGGGGAATCCGTTCTTATGATCTCTATGGTGAAGAAGTTGCAGAAACTAACAAGCAAGAAGGTGCAGCTTATCCTTACCAACAAACCAAAGTTGATCTATGTGGACCCATCAAAGCTAATTGTGAAGGGAAATATAATATGGTCTGATAATCCGAACGATCTAAGCGTCCAAGTGATTAGTCCCTCAAATTTCAAAATCTGCACACCTAAAAAGGTAATGTCATTTGAGGATGCAAAGCAAAGAGCATGGCAGTGGAAAAAGGCAATTGAAGGGCTTCAAAACCGGTGA	1482	0.4285	MLEMEKDFDSKLKIQGNSSSSSNGGGNVQRSKSFAFRAPQENYTIQDFELGKIYGVGSYSKVVRAKKKDTGTVYAMKIMDKKFITKENKTAYVKLERIVLDQLDHPGIVRLYFTFQDTFSLYMALESCEGGELFDQITRKGRLTEDEAQFYAAEVVDALEYIHNLGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSKITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDASEWLIFQRIIAREIRFPDYFSDEARDLIDRLLDLDPSRRPGAGPDGYAALKRNPFFKGVDWNNLRAQVPPKLALEQGTQSPVVDDSQDSSWSPSHIGDGYAASARQPDGATSSSEGTAHITRLASIDSFDSKWQQFLDPGESVLMISMVKKLQKLTSKKVQLILTNKPKLIYVDPSKLIVKGNIIWSDNPNDLSVQVISPSNFKICTPKKVMSFEDAKQRAWQWKKAIEGLQNR*	494

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod06g1168	493	MobiDBLite	consensus disorder prediction	334	375	-	-
	Dod06g1168	493	ProSiteProfiles	Protein kinase domain profile.	48	315	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Dod06g1168	493	PANTHER	SERINE/THREONINE-PROTEIN KINASE	22	489	-	-
	Dod06g1168	493	Coils	Coil	473	493	-	-
	Dod06g1168	493	SUPERFAMILY	PH domain-like	309	492	-	-
	Dod06g1168	493	PANTHER	3-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1	22	489	-	-
	Dod06g1168	493	Gene3D	Phosphorylase Kinase; domain 1	46	131	-	-
	Dod06g1168	493	MobiDBLite	consensus disorder prediction	1	30	-	-
	Dod06g1168	493	SUPERFAMILY	Protein kinase-like (PK-like)	45	379	IPR011009	-
	Dod06g1168	493	CDD	STKc_PDK1	46	315	IPR039046	GO:0004674
	Dod06g1168	493	MobiDBLite	consensus disorder prediction	13	30	-	-
	Dod06g1168	493	Gene3D	Transferase(Phosphotransferase) domain 1	132	330	-	-
	Dod06g1168	493	Pfam	PH domain	390	492	IPR033931	-
	Dod06g1168	493	Pfam	Protein kinase domain	50	301	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Dod06g1168	493	Gene3D	-	363	493	IPR011993	-
	Dod06g1168	493	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	167	179	IPR008271	GO:0004672\|GO:0006468
	Dod06g1168	493	SMART	serkin_6	48	315	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Dod06g1168	493	MobiDBLite	consensus disorder prediction	338	355	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod06g1168	Dod-Chr6	15810049	15817485	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dod06g1168	1	493	AGC Kinase Gene Family	AT3G10540	81.947	0.0	833

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC_PDK1	Dod06g1168		Pkinase	8e-66	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod06g1168	K06276		-	gmx:100788780	902.123