Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1155 ATGGACGTGCCGAAACACCGCGCCACTCGAGCAACGTCCTTGAGAGACGAAACCGAGTCCTCCAAGATGGAAGGCACCGGTAGCTGGGACGCCCTCGAATGGACCAAGATTGAGCCAATTTCGCGTTACGTCTCGCATGCGAATCTCGATTTTTTGCTAGAGGCGGAGCAAGTTCTTGCTGAAGGACATGGTGTTGTTCTTGTTAATAAGGATGAGGCAGGCATGTTGATGGTAACAAATTTTCGACTTCTTTTTCTGAGTGAGGGAACTACAAAAGTTATTGCTCTTGGAACAATACCACTTGCAACCGTTGAGAAGTTTAACAAGATAGTTGCAAAGAATCAATCAAATGCTCGTCAATTAGACAAGATACCCCCACAAAGATTGCTCCAGGTGATTGGAAAAGATATGAGAATTATAGTCTTTGGTTTCAGGCCTCGTACAAAACAGAGGCGTGTAATATTTGATGCCCTGCTGAAGTGTACGAAGCCAGCAAGATTATGGGATCTTTATGCTTTTGCAGCTGGACCTTCTAGGTTTAAGAACGTTAATCCACAGGTGCGATTATTGGATGAGTATTTTCGACTTCTTGGCAAAAGTTCGTATCATGCATCAATCAATATGATTGAAAGTGGGTCCTTCACCTTGTCAAATGACTTATGGAGAATAAGTAGTGTGAATTCCAACTATAAAATGTGTGCGAGTTATCCATTTGCTTTGGTTGTTCCAAAGAACATTAGTGATGATGAAGTGCTCCAGGCTTCCACCTTTCGTGCAAGAGGTCGACTGCCTGTAGTTTCATGGTGCGATCTTGGTACCGGAGCAGTTCTTGCACGTTCATCTCAGCCCCTAGTTGGTCTCATGATGAATATGAGGAGCAACATGGATGAAAAACTTGTGGCTGCACTTTGCGGAAAACTCGATGATGGCTTACAGAGGAAGCTATATATTGCTGATGCGAGGCCAAGGAAAAATGCATTAGCTAATGGTGCCATGGGAGGTGGTTCGGAATCATCGTCAAACTATTTTCAATCTGAGGTAGTCTTTTTTGGGATAGACAACATCCATGCAATGAGAGAGAGCTTTGCTCGGCTGCGAGAATACTTAGACACTCATGGAAAAGCTTCATCAGATGGAATGTCATCATTTTTGAGACATGGTGGGTCAACATGGGGTGGAGGCAATTTAAGTAGTATGTCTACTTCAGTGTCAACCCTTGGGGACAGTGGGTGGTTACTGCATGTTCAAAGTGTCTTGGCTGGTTCAGCTTGGATTGTTGCTCGTATTGCTATGGAGAAGGCTTCTGTTCTCGTACATTGCAGTGATGGCTGGGATAGAACAAGTCAGTTGGTTTCGCTTGCTAATTTGTTGCTTGATCCATATTATCGGACATTCACTGGATTTCAGGCACTTGTTGAAAAAGACTGGCTTGCATTTGGTCATCCATTTAGTGATCGCGTGGCAATGCCACCTCTCTCTGGAGGTGGCAATGTGCCTTTTGAGTTAACCAGGCAGTCTTCAGCTGGCAATTTCCCACCATCATCCATGCGGCAGTCATCAGGAGCATTCACATCCCAACCTCCAGCTTCCTCTCATTCGCATACTTCTAACAACTACTCTCCCATTTTTTTGCAGTGGGCTGATTGTGTTTCTCAATTGTTGCGGATGTATCCCTTTGCTTTTGAGTTTTCTGCGGCTTTCCTGGTGGACTTCTTAGACTGCATGCTTTCTTGTCGTTTTGGAAATTTCTTATGTAATAGTGAGAGAGAGAGACAGCAATGCAATATTTCTGAAGCTTGTGGATGCTTGTGGGTGTACTTGGCTGATTTGCGTGCATCTGAAGGAGATTCTCATGTGCATTATAATCCCTTTTATGATCCACTGAAGCACAATGGTCCTCTTCTGCCCCCAGCAGCAGCATTAGCCCCAACTTTATGGCCTCAATTCCACCTTCGTTGGGCCTGCCCAGAAGAAGCACAACCTGGGGAGATTGAAGCACAATGTAGGAAGATAATTATGAAATACACCGAGATGCAGAAGGCTAAAGAAGTGGCAGAAAGGAAAGCAAAAGAAGTTACAAATGCCATGGAATCACTGAGTGTAGAATTACGAAATGAGAAGCTGCTAAACAGCTCAGCTGTGAATATGGCCAAGAGGGCATGCAAAGAAAATATGGCCATAAAGCGTGCAATGCAGTCAATTGGGTGCAAAGTTCACTTCTCCAGTAGTGGTGATTGCATTGTTGACCTTGAAAGCAACCCAGTGGGAGCATCACAAAACTTTTTATACTGTTCCTCTAGGAAAGAATCAGATGGTTCCATGCCTGATGACCAAAAGGATCTGTCTGTTTCAGTAACACTTACAGCAGATAATGGTGATGATGGAAACAATGCTATTGGTCGAATATGTGAGACTCTATGCCCATTTCGCACTGCAGATGGAGGCTGCAGGTGGCCCAATGGTGGTTGTGCTCAACAAGGTAGCCAGTTTGTTGGTCTTAGGGCAAATTTTGATGCGTTTGATAAACTTTCAATCGATGATAGTTATTTCAAGCCCGAGTAA 2562 0.4422 MDVPKHRATRATSLRDETESSKMEGTGSWDALEWTKIEPISRYVSHANLDFLLEAEQVLAEGHGVVLVNKDEAGMLMVTNFRLLFLSEGTTKVIALGTIPLATVEKFNKIVAKNQSNARQLDKIPPQRLLQVIGKDMRIIVFGFRPRTKQRRVIFDALLKCTKPARLWDLYAFAAGPSRFKNVNPQVRLLDEYFRLLGKSSYHASINMIESGSFTLSNDLWRISSVNSNYKMCASYPFALVVPKNISDDEVLQASTFRARGRLPVVSWCDLGTGAVLARSSQPLVGLMMNMRSNMDEKLVAALCGKLDDGLQRKLYIADARPRKNALANGAMGGGSESSSNYFQSEVVFFGIDNIHAMRESFARLREYLDTHGKASSDGMSSFLRHGGSTWGGGNLSSMSTSVSTLGDSGWLLHVQSVLAGSAWIVARIAMEKASVLVHCSDGWDRTSQLVSLANLLLDPYYRTFTGFQALVEKDWLAFGHPFSDRVAMPPLSGGGNVPFELTRQSSAGNFPPSSMRQSSGAFTSQPPASSHSHTSNNYSPIFLQWADCVSQLLRMYPFAFEFSAAFLVDFLDCMLSCRFGNFLCNSERERQQCNISEACGCLWVYLADLRASEGDSHVHYNPFYDPLKHNGPLLPPAAALAPTLWPQFHLRWACPEEAQPGEIEAQCRKIIMKYTEMQKAKEVAERKAKEVTNAMESLSVELRNEKLLNSSAVNMAKRACKENMAIKRAMQSIGCKVHFSSSGDCIVDLESNPVGASQNFLYCSSRKESDGSMPDDQKDLSVSVTLTADNGDDGNNAIGRICETLCPFRTADGGCRWPNGGCAQQGSQFVGLRANFDAFDKLSIDDSYFKPE* 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1155 853 MobiDBLite consensus disorder prediction 1 25 - -
Dod06g1155 853 MobiDBLite consensus disorder prediction 511 535 - -
Dod06g1155 853 Pfam Myotubularin-like phosphatase domain 189 592 IPR010569 -
Dod06g1155 853 ProSiteProfiles Myotubularin phosphatase domain. 198 650 IPR010569 -
Dod06g1155 853 SMART gram2001c 41 111 IPR004182 -
Dod06g1155 853 Coils Coil 675 702 - -
Dod06g1155 853 PANTHER MYOTUBULARIN-RELATED 19 852 IPR030564 -
Dod06g1155 853 MobiDBLite consensus disorder prediction 1 23 - -
Dod06g1155 853 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 214 654 IPR029021 -
Dod06g1155 853 SUPERFAMILY PH domain-like 52 175 - -
Dod06g1155 853 CDD PTP-MTM-like 261 552 - -
Dod06g1155 853 ProSitePatterns Tyrosine specific protein phosphatases active site. 438 448 IPR016130 GO:0016311|GO:0016791
Dod06g1155 853 Gene3D - 63 162 IPR011993 -
Dod06g1155 853 PANTHER PHOSPHATIDYLINOSITOL-3-PHOSPHATASE MYOTUBULARIN-1 19 852 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1155 1 853 Protein tyrosine phosphatase (PTP) family AT3G10550 67.991 0.0 1174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1155 K18081 - gmx:100781842 1422.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g1155 06 15481795 15502039 Dod06g1155 06 15481795 15502039 ECH