Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1154 ATGGCCACTGAAGAAGAAGAAGAAGAAGACTACTCGCTCCTCGACTCTCCCTCTCACGCGCAGCCCCTTCTCCACGCTCCCACGCGCCACCACTTTCCCTCTTCCTCCTCATCCAGTCCCACCGCTCTCCCTGCCGCCGACTCCGCCACCGCCGACTACTATCCCCACCCTCCCTTGTCCGACGCCGCTTCCGCTGATGACTTCTCCGATCCCGCCCAATCCCGCGCGCCCAATCCAAAACGCTCCTCCTCCGCCACCACCGCCGTCTCCGGCGGCAGCCCCTACTACTACGGCGACGATACCAGCAAGAAGGCAAAGTCCTCCGATCCCGATCCGGCGGCCGAGTTGGCGGCGTTCCCCCACGGAGGTGGCGGCGGTGGCGGAGATTACCGGAAGGACAGGGAGGAGTGGAGCGACGCGGCGATCGCGTGCCTGCTGGAGGCGTACACAGAGAAGTTCAACCAGCTGAACCGCGGGAATCTCCGCGGCCGTGACTGGGAGGAGGTGGCGGCGGCCGTCGGCGAGCGGTGCTGCGGCGGCGAGGGGAGGCAAAGGTTGTACAAGAGCGTGGAGCAGTGCAAGAACAAGATCGATAACTTGAAGAAGAGGTACAAGGTGGAGCTTCAGAGGGTTGAGAGTGTTGGGACTAGTCATTGGCATTGGTTTAAGAAGATTGAAGCTATTGTTGGGAGCTCTGTGAATGTGAAGGCTTCATCTGATGATGAGAAGGGTGGTGGTGGTGGCTCTGCTTCTATGGCTAGGCAACCCAAGAACAGACATGCGGCTAGCAATGCTACCATGGCAAACAACCTCAAATCCAAACCAGCATCGAATCTAAAATGGCGTCGAGTTGTGTTCAAAATAAGTGGCTCTGCATTGGCTGGAAACTGCCAGAGTATTGACCCCAAGGTGGCAATGCAGATTGCTAGGGAAGTGGCAACAGCCTGCCGCCTTGGGGTGGAGGTGGCCATTGTTGTTGGTGGTCGTAACTTTTACTGTGGTGATGCATGGGTGTCTGCTACCGGGTTGGATAGACCTATGGCATACCAAATTGGTATGATGGCAACAGTTATGAATTCGATTCTGCTTCAATCTGCTTTGGAGAAGCTGGGTGTTCAGGCACGTCTGCAAAGTGCATTCTCCATGCCAGAGGTCGCTGAACCTTATAGCAGGCAGCGAGCTATTAGACATCTTGAGAAAGGAAGGATTGTCATGTTTGGTGGCATTGGTGCTGGCACTGGAAATCCACTCTTTACCACCGATACAGCTGCAGCTATCAGAGCTTCTGAGCTTAATGCAGATGCGGTTCTGAAAGGTACTAATGTGAATGGTGTCTTTGACTGCCATAATGACAATGTAACACTTGATCACATCTCCTTTAGGGAAGTTGTATCTAGAGGCACCTCCTGCATGGATATGATGGCGCTAGCATATTGTCAAGAAAATGGAATACCTGTTGTGGTCTTCAACTTGCTTGAACCGGGGAATGTTTCAAGAGCACTATGTGGAGATCAAGTTGGCACTTTGATCGACCAAACGGGAAGAGTGGAGGAGCATCAGCTTCCTAGTTAA 1572 0.5407 MATEEEEEEDYSLLDSPSHAQPLLHAPTRHHFPSSSSSSPTALPAADSATADYYPHPPLSDAASADDFSDPAQSRAPNPKRSSSATTAVSGGSPYYYGDDTSKKAKSSDPDPAAELAAFPHGGGGGGGDYRKDREEWSDAAIACLLEAYTEKFNQLNRGNLRGRDWEEVAAAVGERCCGGEGRQRLYKSVEQCKNKIDNLKKRYKVELQRVESVGTSHWHWFKKIEAIVGSSVNVKASSDDEKGGGGGSASMARQPKNRHAASNATMANNLKSKPASNLKWRRVVFKISGSALAGNCQSIDPKVAMQIAREVATACRLGVEVAIVVGGRNFYCGDAWVSATGLDRPMAYQIGMMATVMNSILLQSALEKLGVQARLQSAFSMPEVAEPYSRQRAIRHLEKGRIVMFGGIGAGTGNPLFTTDTAAAIRASELNADAVLKGTNVNGVFDCHNDNVTLDHISFREVVSRGTSCMDMMALAYCQENGIPVVVFNLLEPGNVSRALCGDQVGTLIDQTGRVEEHQLPS* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1154 523 MobiDBLite consensus disorder prediction 30 45 - -
Dod06g1154 523 Gene3D - 137 206 - -
Dod06g1154 523 MobiDBLite consensus disorder prediction 75 91 - -
Dod06g1154 523 MobiDBLite consensus disorder prediction 238 269 - -
Dod06g1154 523 Coils Coil 183 210 - -
Dod06g1154 523 SUPERFAMILY Carbamate kinase-like 279 510 IPR036393 -
Dod06g1154 523 CDD AAK_UMPK-PyrH-Ec 282 511 IPR015963 GO:0005737|GO:0006221|GO:0033862
Dod06g1154 523 MobiDBLite consensus disorder prediction 1 132 - -
Dod06g1154 523 Pfam Amino acid kinase family 283 490 IPR001048 -
Dod06g1154 523 Gene3D - 272 520 IPR036393 -
Dod06g1154 523 PANTHER KINASE, PUTATIVE-RELATED 9 516 - -
Dod06g1154 523 Pfam Myb/SANT-like DNA-binding domain 134 228 IPR044822 -
Dod06g1154 523 Hamap Uridylate kinase [pyrH]. 279 511 IPR015963 GO:0005737|GO:0006221|GO:0033862
Dod06g1154 523 PANTHER URIDYLATE KINASE 9 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1154 Dod-Chr6 15476882 15480523 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1154 86 248 Trihelix Transcription Factor Family AT3G14180 35.795 8.30e-20 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Dod06g1154 AA_kinase 5.2e-25 No_clan