Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1139 ATGATTTCTTCTGGGATCAACTTGGTGATGACTGTGATTGGGTTTGCGGTGAGCACCATGTTCATTGTCTTCGTGTGCACGAGGCTTGTCTGTGCTCGAATTCACTTGAATGCTTCGAGAAGATCCTTCCCTATTGCTTCCAGATCCAATCTCAGCATGATGGAATGGGGTTACCATGGGCTTGAACGCATAGCTGTAGCCAAATTTCCTACAAAGAAGTTCAGTGACAAGTTTTTTTCCTCTGCAGAAAATTCTCAATGCACAGTCTGCCTCTCAGAGTACCAAGGTGAAGATATACTGCGCATCCTTCCCTATTGTGGACACTCATTCCATGTGACCTGCATAGACTTATGGCTGCAGCAGAATTCCACTTGTCCTGTTTGTCGAATATCATTACGTGAATTTCCTGAGAGAAAGCGGTTATTGCAACCCTTGTTCAGCTCTGCTTTGCGACCACATTATGGCACAGAATCCTTTGACACTTCTCATTATCACTGTATGATGGCTGATAATGAGTTGTCATCAAGAACCCCAGACAACCATGGGGCGAATGCTATACAAGAGGGTCATTTTCCATCAGAAGGTGGCGGCACAGCTGCTAGGAACAATATCACCTGTCTAAGTCCAGGTGATCTCACTAAAGATGAAGAGAAGAAGCATGTAGAGAGCCCATCAAGTTTCTAG 684 0.4488 MISSGINLVMTVIGFAVSTMFIVFVCTRLVCARIHLNASRRSFPIASRSNLSMMEWGYHGLERIAVAKFPTKKFSDKFFSSAENSQCTVCLSEYQGEDILRILPYCGHSFHVTCIDLWLQQNSTCPVCRISLREFPERKRLLQPLFSSALRPHYGTESFDTSHYHCMMADNELSSRTPDNHGANAIQEGHFPSEGGGTAARNNITCLSPGDLTKDEEKKHVESPSSF* 228
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1139 227 MobiDBLite consensus disorder prediction 211 227 - -
Dod06g1139 227 CDD mRING-H2-C3H2C2D_ZSWM2 86 129 - -
Dod06g1139 227 Pfam Ring finger domain 86 129 IPR001841 -
Dod06g1139 227 MobiDBLite consensus disorder prediction 177 227 - -
Dod06g1139 227 ProSiteProfiles Zinc finger RING-type profile. 87 129 IPR001841 -
Dod06g1139 227 SMART ring_2 87 128 IPR001841 -
Dod06g1139 227 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 52 134 IPR013083 -
Dod06g1139 227 PANTHER OS11G0150450 PROTEIN 1 226 - -
Dod06g1139 227 PANTHER OS11G0150450 PROTEIN 1 226 - -
Dod06g1139 227 SUPERFAMILY RING/U-box 81 135 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dod06g1139 Dod-Chr6 15193364 15197110 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1139 45 136 C3H Transcription Factor Family AT4G10150 41.304 2.05e-19 82.0
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1139 - - gmx:100794979 408.683