Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod06g1139 | ATGATTTCTTCTGGGATCAACTTGGTGATGACTGTGATTGGGTTTGCGGTGAGCACCATGTTCATTGTCTTCGTGTGCACGAGGCTTGTCTGTGCTCGAATTCACTTGAATGCTTCGAGAAGATCCTTCCCTATTGCTTCCAGATCCAATCTCAGCATGATGGAATGGGGTTACCATGGGCTTGAACGCATAGCTGTAGCCAAATTTCCTACAAAGAAGTTCAGTGACAAGTTTTTTTCCTCTGCAGAAAATTCTCAATGCACAGTCTGCCTCTCAGAGTACCAAGGTGAAGATATACTGCGCATCCTTCCCTATTGTGGACACTCATTCCATGTGACCTGCATAGACTTATGGCTGCAGCAGAATTCCACTTGTCCTGTTTGTCGAATATCATTACGTGAATTTCCTGAGAGAAAGCGGTTATTGCAACCCTTGTTCAGCTCTGCTTTGCGACCACATTATGGCACAGAATCCTTTGACACTTCTCATTATCACTGTATGATGGCTGATAATGAGTTGTCATCAAGAACCCCAGACAACCATGGGGCGAATGCTATACAAGAGGGTCATTTTCCATCAGAAGGTGGCGGCACAGCTGCTAGGAACAATATCACCTGTCTAAGTCCAGGTGATCTCACTAAAGATGAAGAGAAGAAGCATGTAGAGAGCCCATCAAGTTTCTAG | 684 | 0.4488 | MISSGINLVMTVIGFAVSTMFIVFVCTRLVCARIHLNASRRSFPIASRSNLSMMEWGYHGLERIAVAKFPTKKFSDKFFSSAENSQCTVCLSEYQGEDILRILPYCGHSFHVTCIDLWLQQNSTCPVCRISLREFPERKRLLQPLFSSALRPHYGTESFDTSHYHCMMADNELSSRTPDNHGANAIQEGHFPSEGGGTAARNNITCLSPGDLTKDEEKKHVESPSSF* | 228 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod06g1139 | 227 | MobiDBLite | consensus disorder prediction | 211 | 227 | - | - | |
Dod06g1139 | 227 | CDD | mRING-H2-C3H2C2D_ZSWM2 | 86 | 129 | - | - | |
Dod06g1139 | 227 | Pfam | Ring finger domain | 86 | 129 | IPR001841 | - | |
Dod06g1139 | 227 | MobiDBLite | consensus disorder prediction | 177 | 227 | - | - | |
Dod06g1139 | 227 | ProSiteProfiles | Zinc finger RING-type profile. | 87 | 129 | IPR001841 | - | |
Dod06g1139 | 227 | SMART | ring_2 | 87 | 128 | IPR001841 | - | |
Dod06g1139 | 227 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 52 | 134 | IPR013083 | - | |
Dod06g1139 | 227 | PANTHER | OS11G0150450 PROTEIN | 1 | 226 | - | - | |
Dod06g1139 | 227 | PANTHER | OS11G0150450 PROTEIN | 1 | 226 | - | - | |
Dod06g1139 | 227 | SUPERFAMILY | RING/U-box | 81 | 135 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod06g1139 | Dod-Chr6 | 15193364 | 15197110 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod06g1139 | 45 | 136 | C3H Transcription Factor Family | AT4G10150 | 41.304 | 2.05e-19 | 82.0 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod06g1139 | - | - | gmx:100794979 | 408.683 |