Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1114 ATGGATTTCACTGAGAAAATGCAGCGACTCAAGATGGGTTTCCGTGAATACATACAAGCATTGGAAGATGAGCGCCTAAAGATTCAGGTCTTCTCCAAAGAGCTTCCTCTTTCCTTGGAGCTCGTCACACAAGCCATTGAAACTTGTAAGCAACAGGTGTCAGGGACAACGACGGAGTACAATTTGAACGGACATTCGGAGTGTTCGGAGCAGACAACATCGACGGATGGTCCTGTTTTGGAGGAGTTCATCCCTATCAAGAAGAGGGCATCCCCTGATTGTGACGAAGATGATGAAGATGAGCAACATTCCCATCACCCCAAGATCTCAAAGGCTAGCAAGAACACTGATAAGAAGAAATCTGATTGGCTTAGATCTGTTCAGCTGTGGAACCCAGAATCCTTATCAGCTGAAGAGGATGTGAATAAGAAAGTGTCTCTGGTGGAAGTGAAGAGAAGTGGAAGTGGCGGTGCTTTTCAGCCATTCCACAAAGAGGAAAGGGCTGGCAAGACAAGTGAGTCATTGAGCAAAGCACCCTCTTCGTCGAATACGCCGGTAGCCGCCACGAGTTCTACGGCTGTGGCTGCAGCCAGGGACAATGCTGGAAGCGACAAAAGAGAGGATAAAGAGGGGCAGAGGAAGCAGCGCCGGTGCTGGTCTCAGGAGTTGCATAAGCGCTTCTTGCAGGCCCTTCAGCAGCTTGGAGGTCCAGATTCTGCCACACCAAAGCAAATAAGAGAGCTCATGAAGGTTGATGGCCTCACAAATGATGAAGTCAAAAGCCATCTACAGAAATACCGGTTGCACACTAGAAGACCAAGTCCCATGGTTCACAACAATGCCAATCCACAAACAGCACCCTTTGTCCTAGTAGGCAACATTTTTGTTCAACCACCAGAATATGCAGCAGCTGTGGCTACCTCAACAGCACCTACTGGAATATATGCGCCAGTGGCCACACACCCTCCAGCTGTTCCCCACACAGCATCTGCTGCTGCTGCTGCTGCTTCGGTGAGGAAACCGCAGTTCAAGAAAGCAGAGGTGTCTGAGCAATCACACTCTCAAGGAAGGGCTAATCACAGTGAAGGTGCAGTTCATTCAAACTCACCAGCCTCATCATCATCCACACATACCACCACAACTTCCCATGGCTATTGA 1158 0.4914 MDFTEKMQRLKMGFREYIQALEDERLKIQVFSKELPLSLELVTQAIETCKQQVSGTTTEYNLNGHSECSEQTTSTDGPVLEEFIPIKKRASPDCDEDDEDEQHSHHPKISKASKNTDKKKSDWLRSVQLWNPESLSAEEDVNKKVSLVEVKRSGSGGAFQPFHKEERAGKTSESLSKAPSSSNTPVAATSSTAVAAARDNAGSDKREDKEGQRKQRRCWSQELHKRFLQALQQLGGPDSATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSPMVHNNANPQTAPFVLVGNIFVQPPEYAAAVATSTAPTGIYAPVATHPPAVPHTASAAAAAASVRKPQFKKAEVSEQSHSQGRANHSEGAVHSNSPASSSSTHTTTTSHGY* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1114 385 MobiDBLite consensus disorder prediction 200 218 - -
Dod06g1114 385 Pfam Myb-like DNA-binding domain 216 267 IPR001005 -
Dod06g1114 385 MobiDBLite consensus disorder prediction 173 197 - -
Dod06g1114 385 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 3 381 IPR044787 GO:0003700|GO:0006355
Dod06g1114 385 MobiDBLite consensus disorder prediction 154 218 - -
Dod06g1114 385 Gene3D - 213 271 - -
Dod06g1114 385 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 214 269 IPR006447 GO:0003677
Dod06g1114 385 MobiDBLite consensus disorder prediction 342 385 - -
Dod06g1114 385 MobiDBLite consensus disorder prediction 59 117 - -
Dod06g1114 385 MobiDBLite consensus disorder prediction 82 117 - -
Dod06g1114 385 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 211 271 IPR017930 -
Dod06g1114 385 SUPERFAMILY Homeodomain-like 212 272 IPR009057 -
Dod06g1114 385 MobiDBLite consensus disorder prediction 59 78 - -
Dod06g1114 385 MobiDBLite consensus disorder prediction 352 385 - -
Dod06g1114 385 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 3 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1114 Dod-Chr6 14673759 14675993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1114 1 320 G2-like Transcription Factor Family AT1G68670 50.149 1.66e-83 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Dod06g1114 Myb_DNA-binding 4.4e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1114 - - aprc:113872943 495.738