Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1111 ATGGCCGGACCATCGTGGTTGGTAGACAAAAGCAGAATTGCAACCAAGATAAAGAGTGCATCTGGAGCATTTGGAGAAGTTGTATGGAAAAGCAATCCCTCCAGAGATTGTCCCAATTGCCACCATCTTATTGACAACAGTGACGTACCACAAGAGTGGCCTGGATTGCCAAAAGGTGTGAAATTTGATCCATCTGATCAAGAGTTAATATGGCACTTGCTTGCAAAAGTTGGTGTAGGAAATTCAAAACCTCACCCTTTCATTGATGAATTTATTACTACTCTTGAAGTGGATGATGGAATTTGTTATACTCATCCTCAACATTTACCAGGTGTCAAGCAAGATGGAAGTGCTTCCCACTTTTTCCATAGAGCTGTCAAGGCTTACAATAATGGCAATCGGAAACGTCGAAAAATAAATGACCAGGATTTTGGTGATGTCCGCTGGCACAAGACTGGAAAGACTAAACCTGTGATGTTGAATGGTGTTCAAAAAGGCTGTAAAAAGATTATGGTTCTGTATATGAGCGTGGTGAGAGGAGGAAAAGCTGAGAGAACTAATTGGGTAATGCATCAATATCACCTAGGAACAGAAGAGGATGAAAAGGATGGCGAGTACGTTATCTCGAAAGTGTTTTACAAACTGAGTGAAACTGATGACCATGATATTCCTGAAACCAATGAAGCAACTGTTGCGAAAGCGGTTCCAGCCACTCCCAATTCTGTGACTCCTGAACCTCCTCGTAATGAAAAGCAATGTTCAGATCACCTGGGACAAGAATCACATCACATTCCTCAGCATCCTCAAACGGATTTTGTAGAAGACATTCAAGCTGATTGTGAAGAGATTGCAAAAACTGATCTATCCGGAGTGGAAACTCAAAATAATAAAGGGATAGATAACATAGAAAATAATGCTGATGACGACCGAAATTGGTGGGACAGTGAGTCACAGAATTTGTTGGATTCACAACAACTTGTTGAAGCATTGTCCTTGTGTGATGATCTCCTTCACAGCCAGTCTCCCAATAGGGATGGCAAAATTGGAGAACACGAGGAACAGCCCAGACTTTCTGTTTATGCTCAGCTAGGACCAGAGCATCTGAAGAAAGATATTGAAGAGTGCCAAAGTCTTGCCCTTGATGAAGCTGCCAGTGGGGAGCTTGAGACACCACCTTCAGAGTTTCGACTCAGTCAGCTGGAATTTGGCTCACAGGATAGCTATACTGCCTGGGGTGGCAGCATGGCAGTCAACTGA 1257 0.4296 MAGPSWLVDKSRIATKIKSASGAFGEVVWKSNPSRDCPNCHHLIDNSDVPQEWPGLPKGVKFDPSDQELIWHLLAKVGVGNSKPHPFIDEFITTLEVDDGICYTHPQHLPGVKQDGSASHFFHRAVKAYNNGNRKRRKINDQDFGDVRWHKTGKTKPVMLNGVQKGCKKIMVLYMSVVRGGKAERTNWVMHQYHLGTEEDEKDGEYVISKVFYKLSETDDHDIPETNEATVAKAVPATPNSVTPEPPRNEKQCSDHLGQESHHIPQHPQTDFVEDIQADCEEIAKTDLSGVETQNNKGIDNIENNADDDRNWWDSESQNLLDSQQLVEALSLCDDLLHSQSPNRDGKIGEHEEQPRLSVYAQLGPEHLKKDIEECQSLALDEAASGELETPPSEFRLSQLEFGSQDSYTAWGGSMAVN* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1111 418 Gene3D NAC domain 65 218 IPR036093 GO:0003677|GO:0006355
Dod06g1111 418 ProSiteProfiles NAC domain profile. 56 214 IPR003441 GO:0003677|GO:0006355
Dod06g1111 418 SUPERFAMILY NAC domain 41 214 IPR036093 GO:0003677|GO:0006355
Dod06g1111 418 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 2 412 IPR044799 GO:0003700
Dod06g1111 418 PANTHER SUPPRESSOR OF GAMMA RESPONSE 1 2 412 - -
Dod06g1111 418 MobiDBLite consensus disorder prediction 231 265 - -
Dod06g1111 418 Pfam No apical meristem (NAM) protein 57 195 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1111 Dod-Chr6 14580175 14585537 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1111 34 214 NAC Transcription Factor Family AT5G56620 55.440 8.77e-70 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod06g1111 NAM 2.5e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1111 - - gmx:100787702 675.241