Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1093 ATGGCAAGGATTAAACCTCAGGCTCTGCTGCAGCAAAGCAAACGGAAGAAGGGGCCTTCTCGCATAAGCACTGTCACTATTATATTTTACATGTTGATTCTTGCCCTGATTGGGTTTTTCCTGTTTGCTACCTTCAGATATTGGTCCAACAGGTCAAGATTTCGATCAGAGAATCACTTGGCAGTCTCAGAGCAGCATGATAATACTTTTGTGGACTCAAAGAAATCCGAGCTACCGGGATTTGCTGTTTTAGATACATCTAAAGGCTCTATAACAGTAGAACTTTACAAGGACAATGCTCCTGAAGTTGTTGATGAATTCATTGACTTATGTCAAAAAGGGCATTTCAAGGGGAAGTTTTTTCACCGGGTAATTAAGCACTATGTGATTCAGGCCGGGGATAACCAAGGAGCAGGAGCAACTGAAGATTGGAACTTGAGAGGAAAGCAACATACGAGTGTGAAACATGAAGCATTTATGCTTGGAACTTCCAAGGGGAAACACAATCACAAAGGATTCGATCTTTTCATTACAACTGCACCGATACCGGATCTAAATGAGAAGCTTCTTGTGTTCGGGCAAGTCGTCAAGGGACAGGATGTTGTTCAGGAAATCGAAGAAGTTGATACCGACGAACATTACAAACCTAAAGTTTCTATTGGGATACTTGATGTCACTCTTAAACAGAAAATCTAA 696 0.4138 MARIKPQALLQQSKRKKGPSRISTVTIIFYMLILALIGFFLFATFRYWSNRSRFRSENHLAVSEQHDNTFVDSKKSELPGFAVLDTSKGSITVELYKDNAPEVVDEFIDLCQKGHFKGKFFHRVIKHYVIQAGDNQGAGATEDWNLRGKQHTSVKHEAFMLGTSKGKHNHKGFDLFITTAPIPDLNEKLLVFGQVVKGQDVVQEIEEVDTDEHYKPKVSIGILDVTLKQKI* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1093 231 Gene3D - 65 231 IPR029000 -
Dod06g1093 231 CDD cyclophilin 83 224 - -
Dod06g1093 231 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP21-4 1 231 - -
Dod06g1093 231 SUPERFAMILY Cyclophilin-like 80 227 IPR029000 -
Dod06g1093 231 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 187 202 IPR002130 GO:0000413|GO:0003755
Dod06g1093 231 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 174 186 IPR002130 GO:0000413|GO:0003755
Dod06g1093 231 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 121 133 IPR002130 GO:0000413|GO:0003755
Dod06g1093 231 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 95 110 IPR002130 GO:0000413|GO:0003755
Dod06g1093 231 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 78 227 IPR002130 GO:0000413|GO:0003755
Dod06g1093 231 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 83 225 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1093 Dod-Chr6 14258688 14265611 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1093 80 227 U-box Gene Family AT5G67530 29.870 5.23e-17 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1093 - - gmx:100781538 402.519