Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1091 ATGGCTGCTGCTTCATCATCTACATCATTCTTGGGAATCAGAGAAGAAAACCAAAGCCAGATAACAGTACAACACCAACATCAATCCTCCACAGCTGCTTCCTCAGCTGCTCCAACCTCAGTGCCTCAGAAGAAAAGGAGGAATCAGCCTGGAACACCAAATCCAGATGCTGAGGTGATAGCACTATCTCCCAAGACTCTAATGGCAACAAACAGGTTCATATGCGAGGTGTGCAACAAAGGGTTCCAAAGGGAGCAAAACCTACAGCTCCACAGAAGAGGACACAACCTCCCTTGGAAGCTAAAGCAGAAGACAAACAAAGAGCCAAAGAGAAAGGTGTATCTGTGCCCTGAGGCCACATGCGTCCACCATGACCCTTCAAGGGCCTTGGGAGACCTCACTGGGATCAAGAAGCACTACTCTCGCAAGCACGGCGAGAAGAAGTGGAAGTGCGAGAAGTGCTCAAAGAAGTATGCTGTTCAATCAGATTGGAAGGCTCATTCTAAGACTTGTGGCACCAGAGAATATAGATGTGACTGTGGCACCCTCTTCTCTAGGCGTGACAGTTTTATCACCCATAGGGCCTTTTGTGATGCGCTAGCACAGGAGAGTGCGAGGCACCCTAATAGCTTAAACCCTTTGGGGACACATTTGTATGCCACAAACCACATGACCTTAGGCCTATCCCAAGTTGGCACCCAAATTCCCCAACTGCAAAACCATCATAACCAAAGCGGCTCTAACAGCATTTTGCGCCTTGGCAGTGCTGGATCGGCAAAGTTTGAGCACTTAATCCCGCCATTAAATCAGCCCCCTCCATTTGGACACTCACCACAATCACTGTCCAATCCCTCGCCTTTCTTTATGAATGACCCAAATCAAGCATTTGAAGAGCACCACCAATCTCAGCAAGGACCATTCTCAAGCAAGCAACTAAATGGCCTAATGCAGCTCCCTGATCTTCAAGGCAACACCAACAACACCAATCCAGCATCATCAGTGGCTGCTCCTAATTCCAACCTTTTCAACCTCAGCTTCTTTCCAAATAGCAGCAACAGCACTGGCACCCTAATCCCTGACCAATTCAACAGCATAAGTGGTGGTGGCAATAACCAAGGAACAACAACACTCTACATTAACAACAACCCTGTTGTGAGTGATCATCAAGTTGGTTCAGGTTTGTCTTCACTCTTTGGCAACTCTTCATCAGTGCAACACGAGAACATGTCCCCTCATATGTCAGCCACCGCATTGCTTCAGAAAGCTGCTCAAATGGGTTCAACTACGACCACCAACAATGGTTCCTCTTTACTTAGAGGAATGTGCGGTTCCTCAACCAATGGTGCCAAATCTGAGAGGAAGCTTGTGTCTGATCACATTGCCACTTTTGGAAGTGATCATAGGAGGGGAGAAGGGTTAAGATCAAGCATGGAAAATGAGCACCACCACCTTCATGGATTGATGAATACCATAGCCAATGGGAACACTTCCATGTTTGGCAATGTGCAAGGGAATGAAAACAACCTTAGTCAGTTTCACAACGTGATGGAGGAGTCTAACACTAAGTTGCAACAAAATCTTGGTGTGAGTTTTGGAGGGTCTGATAAGTTGACATTGGACTTTCTTGGTGTTGGAGGAATGGTGAGAAACATGAGTGGCGGATTAATTTCACAAAGAGAACCACAACAACAACAACGTGTGATGAGTACTATGAGATCTTTGGATCCCGATGACCTAAAATCAGCACATTCAAGCCACCATTTTGGAAGCTCAACTTTGCAATGA 1785 0.4644 MAAASSSTSFLGIREENQSQITVQHQHQSSTAASSAAPTSVPQKKRRNQPGTPNPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTNKEPKRKVYLCPEATCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARHPNSLNPLGTHLYATNHMTLGLSQVGTQIPQLQNHHNQSGSNSILRLGSAGSAKFEHLIPPLNQPPPFGHSPQSLSNPSPFFMNDPNQAFEEHHQSQQGPFSSKQLNGLMQLPDLQGNTNNTNPASSVAAPNSNLFNLSFFPNSSNSTGTLIPDQFNSISGGGNNQGTTTLYINNNPVVSDHQVGSGLSSLFGNSSSVQHENMSPHMSATALLQKAAQMGSTTTTNNGSSLLRGMCGSSTNGAKSERKLVSDHIATFGSDHRRGEGLRSSMENEHHHLHGLMNTIANGNTSMFGNVQGNENNLSQFHNVMEESNTKLQQNLGVSFGGSDKLTLDFLGVGGMVRNMSGGLISQREPQQQQRVMSTMRSLDPDDLKSAHSSHHFGSSTLQ* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1091 594 SUPERFAMILY beta-beta-alpha zinc fingers 72 169 IPR036236 -
Dod06g1091 594 MobiDBLite consensus disorder prediction 555 571 - -
Dod06g1091 594 ProSiteProfiles Zinc finger C2H2 type domain profile. 73 95 IPR013087 -
Dod06g1091 594 ProSitePatterns Zinc finger C2H2 type domain signature. 75 95 IPR013087 -
Dod06g1091 594 Gene3D Classic Zinc Finger 52 124 - -
Dod06g1091 594 Pfam Zinc-finger double-stranded RNA-binding 73 95 IPR022755 -
Dod06g1091 594 MobiDBLite consensus disorder prediction 553 594 - -
Dod06g1091 594 MobiDBLite consensus disorder prediction 1 50 - -
Dod06g1091 594 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 1 556 - -
Dod06g1091 594 SMART c2h2final6 149 169 IPR013087 -
Dod06g1091 594 SMART c2h2final6 73 95 IPR013087 -
Dod06g1091 594 SMART c2h2final6 114 144 IPR013087 -
Dod06g1091 594 Gene3D Classic Zinc Finger 127 206 - -
Dod06g1091 594 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 1 556 - -
Dod06g1091 594 MobiDBLite consensus disorder prediction 1 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1091 Dod-Chr6 14211409 14216033 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1091 10 553 IDZ Gene Family AT2G02070 46.064 6.00e-130 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Dod06g1091 zf-C2H2_jaz 3.7e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1091 K25870 - gmx:100780268 728.398