Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1078 ATGGATGCTAGAGAAAATGCGGTCGCAACTCTCTTTAGTTTATCTGTTGTAGACGAGAACAAGGTTGCAATAGGAGCAGTTGGAGCTATACCGCCTCTTATAAAGTTTCTATGTGAAAGTACTCCCAGTGGTAAGAAGGATGCTGCTTATGCTATCTTTAATCTTTTAATCTATGAAGGGAACAAAGTAAGATCTGTAAAAGCTGGCATAGTGGCACTACTGATGCTGTTTTTGAAGGATACTAGGGGTGGAATGGTAGATGAAGCTCTAGCTATAATGACAATCATTGCAAGCCACAGCCACCATGAAGGAAGGATAGCAATTGGTCAGGCTGAACCGATCCCTATTCTAGTGGAGGTTATCCGAACTGGCTCTCCACGCAACAGGGAGAACGCTGTGGCCATCTTGTGCTCGTTGTGCATAGGGGATCTACAGCAACTGAAACTAGCAAAGGAACTTGGTGCAGAAGAAGCATTGCAGGAGTTATCCAAAAATGGCATTGATAGAGCCAAGAGAAAAGCTGGATGTATGTTAAGACTCTTGCATGGGTTGGAAGGGAACTCGAATCAAATAGAGACGCATGACTCATCGGCAATGCAGGCACCTGATGAAAATGCAATGGAAGTAAATTCTACGGAGGAAACCATTGATCATCCTGAAATACTGTCTTTTGGTGCTGATGCTATTCAAGTCCATGTGAATGAGTTGGAGGCCCCTGAGTCAATGTCAATTCATCCAGATATAGAAGAAGTCGGGACTAATTCTGTCGAGCAACTGATGGAAGTTATCATTAGCCTCTCATAA 804 0.4341 MDARENAVATLFSLSVVDENKVAIGAVGAIPPLIKFLCESTPSGKKDAAYAIFNLLIYEGNKVRSVKAGIVALLMLFLKDTRGGMVDEALAIMTIIASHSHHEGRIAIGQAEPIPILVEVIRTGSPRNRENAVAILCSLCIGDLQQLKLAKELGAEEALQELSKNGIDRAKRKAGCMLRLLHGLEGNSNQIETHDSSAMQAPDENAMEVNSTEETIDHPEILSFGADAIQVHVNELEAPESMSIHPDIEEVGTNSVEQLMEVIISLS* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1078 267 Gene3D - 1 191 IPR011989 -
Dod06g1078 267 Pfam Armadillo/beta-catenin-like repeat 18 55 IPR000225 GO:0005515
Dod06g1078 267 PANTHER U BOX DOMAIN-CONTAINING 1 182 - -
Dod06g1078 267 SUPERFAMILY ARM repeat 2 187 IPR016024 -
Dod06g1078 267 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 14 1 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1078 Dod-Chr6 14026343 14027438 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1078 1 186 U-box Gene Family AT3G54850 64.516 1.63e-67 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1078 - - lja:Lj5g3v1796810.1 275.404