Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1049 ATGGAGAATTCTAAGGTGAATTTGAGCAATTGCAATGGGTCCATGAACCTTTGCAATGGTAGCACTGATGACCCATTGAACTGGGTCATGGCTGCGGAGGCCTTGAAAGGTAGCCACCTTGATGAGGTGAAACGCATGGTAGACGAGTACCGGAAGAAGGTGGTGTTTCTGGGTGGTAAAGGGCTGACCATATCACAGGTGGCGGCGGTGGCCACACACGACGGCGGCGTGGCGGTGGAGCTGGCTGAGGAGGCACGTGCCGGCGTGAAGGCTAGCAGTGATTGGGTGAGGGATAGCATGGACAAAGGCACTGACAGCTATGGTGTCACAACAGGGTTTGGTGCAACCTCACATAGGAGAACCAAGCAAGGTGGTGCCCTCCAAAACGAGCTCATAAGATTCTTGAATGCTGGCATTTTCGGCAGTGGCACAGAATCATGCCACACATTACCTCACACAGCCACAAGGGCTGCCATGCTTGTTAGGATCAACACATTGCTTCAAGGGTATTCAGGGATCAGATTTGAGATCTTGGAAGCTATCACCAAGTTCCTGAACCATAACATAACTCCATGCCTCCCTCTCAGAGGCACAATCACTGCATCTGGTGACCTTGTCCCTTTGTCCTATGTTGCTGGCCTTTTGATTGGAAGGCCAAACTCCAAGTCCATTGGACCAAAGGGACAAGTTCTCAATGCCACAGAGGCCTTTGATCTGGCGGGGATCAATGGTGGTTTCTTTGAGTTGCAACCAAAAGAGGGTTTAGCTCTAGTGAATGGCACTGCAGTAGGGTCTGGCTTAGCTTCTATGGTTCTGTTTGAGGCTAACATACTTGCTGTCCTCTCTGAAGTCATGTCCGCGATTTTCGCCGAAGTTATGCAGGGGAAACCGGAGTTCACTGACCACTTGACTCATAAATTGAAGCACCACCCTGGCCAAATTGAGGCTGCAGCTATAATGGAACATATTTTGGATGGAAGCTCATATGTTAAGGCTGCACAGAAGTTGCATGAGATTGATCCCCTTCAGAAGCCTAAACAGGATAGGTATGCTCTTCGAACATCGCCTCAGTGGCTTGGACCGCAGATTGAAGTGATCAGGCATGCAACAAAGATGATTGAGAGGGAGATCAACTCTGTGAATGACAATCCATTGATTGATGTTTCGAGGAATAAGGCGCTTCATGGAGGGAATTTCCAAGGCACCCCAATTGGTGTTTCAATGGATAACACCCGTCTAGCTATTGCTTCAATTGGGAAACTTATGTTTGCACAATTCTCTGAGCTTGTGAATGACTTCTACAACAATGGCTTGCCTTCGAATCTGACGGCTAGCCGCAACCCGAGCTTGGATTATGGCTTCAAAGGGGCTGAAATTGCAATGGCATCCTACTGCTCAGAACTCCAATACCTTGCCAATCCTGTCACCAATCATGTCCAGAGTGCAGAACAGCATAACCAGGATGTGAACTCTCTGGGCTTGATTTCCTCAAGAAAGACAGCTGAAGCAGTTGATATTTTGAAGCTCATGTCCTCCACTTTCTTGGTAGCATTGTGCCAAGCCATTGATCTAAGGCATTTGGAAGAGAACCTGAAGAACACTGTCAAGAACACTGTCAGCCAAGTGGCCAAGAGGGTCCTCACAATGGGTGTCAATGGTGAATTGCATCCATCGCGCTTTACCGAGAAGGACCTGCTGAAGGTTGTTGACCGTGAGTATGTCTTTGCTTACATTGATGAACCTTGCAGTGCAACCTACCCTCTAATGCAGAAGCTGAGACAAGCCCTGGTTGATCATGCATTGCAAAATGGTGACAAAGAGGCCAATTCAAGTACCTCAATTTTCCAAAAGATTGGAGCCTTCGAGGAAGAGCTCAAGGCCCTTTTACCCAAGGAGGTGGAAAGTGCAAGAATTGAAGTTGAGAGTGGAAATCCTGCTATTCCTAACAGAATCAAGGAATGTAGGTCCTATCCATTGTACAAGTTTGTCAGGGAGAATTTGGGTACAACTTTGCTGACAGGTGAGAAGGTTAGGTCACCTGGTGAGGAGTGTGATAAGGTATTCTCTGCAATGTGTGAAGGGAAGTTGATTGACCCTATGTTGGACTGTATAAGGGAGTGGAATGGTGCGCCTCTACCAATATGCTAG 2148 0.4781 MENSKVNLSNCNGSMNLCNGSTDDPLNWVMAAEALKGSHLDEVKRMVDEYRKKVVFLGGKGLTISQVAAVATHDGGVAVELAEEARAGVKASSDWVRDSMDKGTDSYGVTTGFGATSHRRTKQGGALQNELIRFLNAGIFGSGTESCHTLPHTATRAAMLVRINTLLQGYSGIRFEILEAITKFLNHNITPCLPLRGTITASGDLVPLSYVAGLLIGRPNSKSIGPKGQVLNATEAFDLAGINGGFFELQPKEGLALVNGTAVGSGLASMVLFEANILAVLSEVMSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKAAQKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRHATKMIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLTASRNPSLDYGFKGAEIAMASYCSELQYLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKNTVKNTVSQVAKRVLTMGVNGELHPSRFTEKDLLKVVDREYVFAYIDEPCSATYPLMQKLRQALVDHALQNGDKEANSSTSIFQKIGAFEEELKALLPKEVESARIEVESGNPAIPNRIKECRSYPLYKFVRENLGTTLLTGEKVRSPGEECDKVFSAMCEGKLIDPMLDCIREWNGAPLPIC* 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1049 715 Gene3D - 16 261 IPR024083 -
Dod06g1049 715 Gene3D - 528 649 IPR023144 -
Dod06g1049 715 SUPERFAMILY L-aspartase-like 24 715 IPR008948 GO:0003824
Dod06g1049 715 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 24 704 IPR005922 GO:0005737|GO:0006559|GO:0016841
Dod06g1049 715 PANTHER HISTIDINE AMMONIA-LYASE 18 715 IPR001106 -
Dod06g1049 715 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 197 213 IPR022313 GO:0016841
Dod06g1049 715 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 18 715 - -
Dod06g1049 715 Gene3D Fumarase/aspartase (Central domain) 262 710 - -
Dod06g1049 715 CDD PAL-HAL 60 525 IPR001106 -
Dod06g1049 715 Pfam Aromatic amino acid lyase 62 538 IPR001106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1049 Dod-Chr6 13455577 13461267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1049 24 715 Monolignol Biosynthesis Gene Families AT3G53260 83.526 0.0 1228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1049 K10775 - gmx:100818777 1300.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2736 01 67048859 67052779 Dod06g1049 06 13455577 13461267 ECH
Dod06g1049 06 13455577 13461267 Dod06g1049 06 13455577 13461267 ECH