Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1033 ATGGCGAAGGACGTTGAGGTTGCTGAGAGAGGGTCGTTCTCAGGGAAGGACTACCAGGACCCTCCACCTGCACCCCTCATCGATGCAGAGGAGCTCACAAAGTGGTCCTTCTACAGGGCACTCATTGCTGAGTTCATTGCCACACTGCTCTTCCTCTACATCACTGTGCTCACTGTGATTGGTTACAAGAGCCAGAGTGATGTCAACGCTGGTGGTGATATCTGTGGTGGTGTTGGCATTCTTGGTATTGCATGGGCCTTTGGTGGCATGATCTTCATCCTTGTTTACTGCACTGCTGGCATCTCTGGTGGTCACATCAACCCAGCAGTGACATTTGGGCTGTTCTTGGCACGCAAGGTGTCTCTGGTAAGGGCCATCTTGTACATGGTTGCTCAATGCTTGGGTGCTATCTGTGGAGTTGGTTTGGTGAAGGCATTCCGGAAGCCCCTCTATGACAGATATGGTGGTGGGGCCAACTCCCTCAGCGATGGCTACAGCAAAGGCACTGGTTTGGGTGCTGAGATCATTGGAACCTTTGTTTTGGTCTACACTGTCTTCTCTGCCACTGATCCCAAGAGGAGTGCTAGAGATTCCCATGTCCCGGTTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCATGGTTCACTTGGCCACCATCCCGGTCACTGGCACTGGCATCAACCCTGCAAGGAGTCTTGGGGCTGCTGTTATCTACAACAAAGATAAGCCCTGGGATGACCATGTGAGTATCCTTTTCCATAGTTTAAACACATATATATATACAAACTGGCTATTTTATGTAAAGTTGTCGACTAAGGAAAGATTGAAAAAAGAAAAGAAAAAGATGGCTACTTTGTCTGATGTTTTGTTCCTTTCTGTTGTGGTCAGTGGATCTTTTGGGTTGGACCATTTATTGGGGCAGCCATTGCAGCCTTCTACCACCAGTTCATTTTGA 957 0.4859 MAKDVEVAERGSFSGKDYQDPPPAPLIDAEELTKWSFYRALIAEFIATLLFLYITVLTVIGYKSQSDVNAGGDICGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRAILYMVAQCLGAICGVGLVKAFRKPLYDRYGGGANSLSDGYSKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYNKDKPWDDHVSILFHSLNTYIYTNWLFYVKLSTKERLKKEKKKMATLSDVLFLSVVVSGSFGLDHLLGQPLQPSTTSSF* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1033 318 MobiDBLite consensus disorder prediction 1 24 - -
Dod06g1033 318 PRINTS Major intrinsic protein family signature 87 111 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod06g1033 318 PRINTS Major intrinsic protein family signature 173 191 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod06g1033 318 PRINTS Major intrinsic protein family signature 209 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod06g1033 318 PRINTS Major intrinsic protein family signature 124 143 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod06g1033 318 PRINTS Major intrinsic protein family signature 39 58 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod06g1033 318 SUPERFAMILY Aquaporin-like 31 239 IPR023271 -
Dod06g1033 318 CDD MIP 39 248 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod06g1033 318 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 251 IPR034294 -
Dod06g1033 318 Gene3D Glycerol uptake facilitator protein. 24 280 IPR023271 -
Dod06g1033 318 Pfam Major intrinsic protein 31 249 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod06g1033 318 TIGRFAM MIP: MIP family channel proteins 43 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod06g1033 318 ProSitePatterns MIP family signature. 105 113 IPR022357 -
Dod06g1033 318 PANTHER AQUAPORIN PIP2-4-RELATED 1 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1033 Dod-Chr6 13218902 13222804 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1033 1 248 Major Intrinsic Protein MIP AT2G37170 85.484 6.24e-156 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1033 K09872 - gmx:100817292 462.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g1033 06 13218902 13222804 Dod06g1033 06 13218902 13222804 ECH