Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1020 ATGGGTTGTTGTTCCAGATTCTGTGTTGTTCTGCTTTTGTTGATTCCTGTTGGGGTTTCCTTAGCTTTCCCAATAGAAGATCAGGAGAGAGATATGATCACTGAGCTGCCAGGGCAGCCAAAGGGTGTGGCGTTTGCTCAGTATTCAGGCTATGTGACTGTGAATGAGCAGAGTGGGAGGGCATTGTTTTACTGGTTGGTTGAGGCACCAGTTAGCCGTGGACCTGAGTCAAGGCCACTGGTGTTGTGGCTCAATGGTGGCCCTGGATGCTCCTCTATTGCTTATGGTGCATCTGAAGAAATTGGCCCTTTTCGTATTAACCCTGATGGGAAGTCACTTCACTTGAATGCTTATGCTTGGAACAAATTGGCAAATATACTATTCCTTGATTCTCCTGCTGGTGTTGGCTTTTCCTACTCGAATAAGACAACGGATCTGTATACATTTGGTGACCAGAGAACAGCTGAAGATGCGTATGCATTTCTTTGTAATTGGTTTGAAAGATTTCCTCAGTATAAGCATAGAGAATTCTACATTGCTGGAGAAAGCTATGCAGGTCACTATGTTCCTCAGTTGGCTCAAATTGTTTATGAGAGAAACAAGGGAATCAATAATCCAGCTATAAATTTTAAGGGATTTATGGTTGGAAATGCTGTTACTGATGATTTTCATGATTATGTTGGCACATTTGAGTACTGGTGGACCCATGGCTTGGTTTCAGATTCCACATATAGGATGCTGAGAATTGCCTGTGACTCTGGGTCCTCACAGCATCCATCAGTGCAATGCATGAATGTTCTCAGAGTTGCAGTGGCGGAGCAGGGTAACATTGATCCATATAGCATTTATACACAGCCTTGTAACGATACAGCATCACTCAGACGCAGCTTGGGGGGTCGCTATCCATGGATGTCCCGAGCATATGATCCATGTACTGAAAGGTATTCTGACCTGTATTTCAATCATCCGAAAGTTCAGAAGGCACTTCATGCCAATGTAACAGGGATTCCTTATTCATGGAAGACATGCAGTGATACTGTGGGGAACTATTGGACTGATTCTCCGCTATCTATGCTTCCTATATATTGGGAACTTATTGATGCGGGTCTCAAGATATGGGTATACAGTGGAGACACTGATTCTGTGGTTCCAGTAACCGCCACTCGTTACTCTATTGATGCCTTGAAGCTACCTACCATCATCAACTGGTACCCTTGGTATGATAATGGCAAGGTTGGTGGGTGGAGTCAAGTTTACAAAGGGCTCACATTGGTTACAGTAAGAGGAGCTGGACATGAGGTTCCACTTCATAGGCCTCGCCAAGCATTCATTCTTTTCAGGTCATTCTTGGAGGACAAGCCAATGCCATCATCTTCAAGTTAG 1383 0.4425 MGCCSRFCVVLLLLIPVGVSLAFPIEDQERDMITELPGQPKGVAFAQYSGYVTVNEQSGRALFYWLVEAPVSRGPESRPLVLWLNGGPGCSSIAYGASEEIGPFRINPDGKSLHLNAYAWNKLANILFLDSPAGVGFSYSNKTTDLYTFGDQRTAEDAYAFLCNWFERFPQYKHREFYIAGESYAGHYVPQLAQIVYERNKGINNPAINFKGFMVGNAVTDDFHDYVGTFEYWWTHGLVSDSTYRMLRIACDSGSSQHPSVQCMNVLRVAVAEQGNIDPYSIYTQPCNDTASLRRSLGGRYPWMSRAYDPCTERYSDLYFNHPKVQKALHANVTGIPYSWKTCSDTVGNYWTDSPLSMLPIYWELIDAGLKIWVYSGDTDSVVPVTATRYSIDALKLPTIINWYPWYDNGKVGGWSQVYKGLTLVTVRGAGHEVPLHRPRQAFILFRSFLEDKPMPSSSS* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1020 460 ProSitePatterns Serine carboxypeptidases, serine active site. 179 186 IPR018202 GO:0004185
Dod06g1020 460 ProSitePatterns Serine carboxypeptidases, histidine active site. 422 439 IPR033124 GO:0004185
Dod06g1020 460 SUPERFAMILY alpha/beta-Hydrolases 28 456 IPR029058 -
Dod06g1020 460 PANTHER CARBOXYPEPTIDASE 13 457 - -
Dod06g1020 460 Gene3D alpha/beta hydrolase 27 289 IPR029058 -
Dod06g1020 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 422 435 IPR001563 GO:0004185|GO:0006508
Dod06g1020 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 116 128 IPR001563 GO:0004185|GO:0006508
Dod06g1020 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 139 IPR001563 GO:0004185|GO:0006508
Dod06g1020 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 165 190 IPR001563 GO:0004185|GO:0006508
Dod06g1020 460 Gene3D - 358 451 - -
Dod06g1020 460 Gene3D - 311 347 - -
Dod06g1020 460 Pfam Serine carboxypeptidase 37 451 IPR001563 GO:0004185|GO:0006508
Dod06g1020 460 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 13 457 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1020 Dod-Chr6 13024695 13029001 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1020 321 455 Calmodulin-binding Proteins AT2G22960 29.412 8.79e-15 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1020 K16297 - gmx:100812000 853.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g1020 06 13024695 13029001 Dod06g1020 06 13024695 13029001 ECH