Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1017 ATGCCTCCTGAACCGTTGCCTTGGGATCGGAAGGACTTCTTCAAGGAGAGGAAGCACGAGAGGTCCGAATCTGTTGGCTCCGTCGCCAGATGGAGAGATTCCTCGCATCACCACCGCGGCGCCGACTTCCACCGCTGGGGATCCGCCGACTTTCGCAGACCGCCTGGTCATGGTAAGCAGGGTGGTTGGCACCTGTTTTCTGAAGAATCTGGTCATGGGTATGCGATCTCTCGGTCCGGCGACAAGATGCCGGAGGATGATAGCCGGCCATCTGTTTTGCGCAGTGATGGGAAATATGGCAGGAGCAGTAGGGAAAATAGAGGACCCTTTGGCCAGAGAGATTGGAGGGGGCATTCGTGGGAAACCGCCAATGGTTCTGTAAATTTCTCACGGAGGCTGCCGGATGTGAATAATGACCAGAGGTCAGTTGATGATGCCTTTGCATATTCATCTCATCCACATTCTGATTTCGTAAATACTTGGGATCCGCGCCACTTGAAAGACCAGCATGATAAGGTGGGTTGTGTCAATGGGTTGGGAGCAGGCCCGAGCTGCGATAGAGAGAATTCTCTGGGTTCAATGGACTGGAAGCCACTTAAATGGACCCGTTCTGGAAGCTTGTCGTCACGAGGCTCTGGTTTTAGCCACTCAAGTAGCTCGAGGAGCATGGGAGGGGCAGATTCCAATGAAGCCAAGGCTGAGTTGCAACCCAAAAATGTAACTGCAAATGAGTCTTATTCAGAGGAAGCTGCGGCATGCATGACATTTTCTGCACCATCTGAAGATGCAACTTCTAGAAAGAAACCGAGGCTAAATTGGGGAGAGGGACTTGCGAAGTATGAGAAGAAAAAAGTCGAAGGGCCTGATGTAAGCGCTAACAATGATGGCCCTGTTTTGTCTGGTAGTAATATGGAGCCTTGTACTTTCCTCAGTCCCAGCTTAGTAGATAAAAGCCCGAAAGTCGCAGGATCTTTAGACTGTGCATCTCCTGCAACGCCATCTTCTGTTGCCTGCAGTTCATCACCAGGTGTGGATGATAAATTATTTGGAAAAATTGCAAATGTGGACAATGATGCTAGTAATTTGACTGGTTCACCTGGTCCTGGGTCCCAAGATTATCTGCAGAGGTTTTCTTTTAATTTAGAGAAATTGGATATTGACTCCTTGAACAATCTGAATTCTTCAATTATTGAGCTGATACAATCTGATGATTCAAGTTTTGTGAACTCTGGTATAGTGAAGTCCACTGCAATGAATAAGTTACTGATATGGAAAGCTGACATTTCAAAGGTATTGGAGACAACTGAATCTGAAATTGATTCACTTGAAAATGAACTGAAGTCACTAAGATCTGAATCTGGGGATAGATGTCTGTGTCCAGGAGGTCTGGGCTCCCAGCTGGTCGGTAACAATGAGAAATCTTTTGAAGAACCTGTTGGAGTCTCTGATGAGGCTGCTCGGCCAGAGCCCTTGAAAATTGTTTCTTCTAACGACCCCAATACTGAGAAAATGCCTCTTTCAACTAATATACATAGTGGCGAAGAAGAGGACATTGATAGTCCTGGATCTGCAACATCTAAATTGGTAGAGCCTTTGCCTTTGGCTAAAGCAGTTTCTTCATGTGATACCAGGAGATATGATAACTTATCTGGGGATATGGATGCTTTACAGTCTACTTCCATGAAGTGCTTAGTTCCCTGTATTACTAGCAAATATGCTAGTGTATCTGCTTCCGGTGATCGCAACACATCTTCGGAAGTGACAGATAGCAGGATTGCTTCCTCTGATGCTAGCTTATGTTCCAGTGCTGGTGATTGTTTATATGAGAACGTTATTTCTTCTAATAAAGAATTGGCTAAAACAGCATGTGGATTATTTTCTAAATTATTGCCGAATGGATGTTGTGAGATTGGCAATACAGGAGATAGCAGTGACTCTTGCTCCCAGGCATTCATTATGGAAAAATTTGCTGAGAAAAAGCGGTTTGCAAGGTTTAAAGAGAGAGTTATCGTGCTTAAGTTCAATGCCTTGCATCACCTGTGGAAGGAAGATTTGCGCATGATGTCTATAAGGAAATGTCGACCAAAATCTCACAAGAAACATGAACTAAGTGTGCGAACTACCTGTAATGGTAATCAGAAGAATCGATCCTCCAATCGCTCTCGTTATTCTTTCCCTGCAAGAAATCATCTAAGCTTGGTTCCAACATCTGAGATGATTAATTTTACGAGCAAAATGCTTTCGGAATCCCCAGTAAAAGTTCACAGAAATGCCCTGAAGATGCCAGCATTAATTTTGGATGAGAAGATGACAATCTCAAAGTTTGTATCTAGTAATGGGCTTGTCGAAGATCCGTTGGCTATTGAGAAAGAAAGGGCTATGATTAATCCATGGACACCTGAAGAAAGAGAAATTTTCTTGGAGAAATTTGTGGCCTTTGGAAAAGATTTTCGGAAAATTGCTTCTTTCCTTGACCACAAGACAACTGCCGACTGCGTTGAATTCTATTACAAAAATCATAAATCTGATTGTTTTGAGAAACTCAAGAAGCACAATTTCGATAAGCTAGGGAAGCCATTTTCAACTAAAAATGACTTGGTGGCATCAAGTAAAAAATGGAATCGTGAAGCTGCTTCCCTTGAGATTTTGAGTGCAGCTTCAGTGATGGCAGATGGCTTAGCATGTAATAGAAGAATGCGTGCTGGAAGCTTCCTTATTGGTGGATACAATAATGTGAAAATCTCAAGGGGTGAGGAAAGCAGCAGAGAGAGATCAAGCAGTTTTGACATGCTTTGGGATGAAAGAGAGGCTTTTGAGGCTCTGAGTTTGTGTGCAACACGTTCAGTTGAACCTCTTGAAGGTAACCGGGATAGGAAATTCCTGAAAGTGTGCAAGCAGCCGTTGACACCTGATGCTACTCAGAATGTTGATGATGGGAGTTGCTCAGATGAGAGCTGTGGTGAAATGGATCCTAGTGATTGGACTGATGATGAGAAGGCAGCTTTTATTCAGGCTGTATCATCCTTTGGAAAAGATTTTATAAAGATAGCGCGGTGCGTTGGAACTAGGTCCCCAGAACAATGCAAGGTTTTCTTCAGCAAGGCTCGAAAATGCCTTGGATTAGATCTCGTGCGCCCCATACCTCAAAATGTTGGATCCCCAGCAAATGATGATGCAAATGGTGGCGGGAGTGACACAGATGATGCATGTGTTGTAGAGACAGGTTCGGTGGTTGGCACTGATAAGTCTGGCACTAAAACAGATGAGGACCTGCCTTCCTCTGTTGTGAACACAGACCATGATGAGTCGGATCCTGTGGAAGCAAGGGACCTGTCAGCTGAATTAAATGAATTGGAAGATATTGATGGTACAGCAATAGATCATGAAGATGCAAATCTGGTCTCTGATGCTTGTGCAACTAGTGGTGAACCTAAGCTGGGCGTTGATGGTAGTGAAGCTGTCTTGTGCAATCTGGATAAATCCGGTTCTGTCAGTGCACAGGCCGCTATGATTATGTCAGATAGCGTAGAAGGTGGAGAAGAGAGAGCAAATGAAGTTGGTGGTGCAGCTGCTCTTGACACAATTGAACCATACGAGAGTAATTCTGCTGGTGAGGATAGACTCGTTTCTGAGGTTTCTTCTGGGGGTCTTGGAAATGAATTGGAGAGGCAAAGCTTGTCTTTGCCCCTATGTCCTGATGATAGAGATGATAAACTTGTTGGTACAGGTGGTGTAGCCGAATTGAAAATCTCAGTCCAAGGTTCATGCACTGCTACAGCAAACACTTCACTCTCATCTGTTGGAAATTCTTGTTCAGGATTGAGTTTTGATACTGAAAGGAAGCATGTGTCCCTTCGAAAGCTTCATATCCCTGCATTATATATGGAGGATCGCCATGCAACTGCAAATTCAGTGTCACAAAATACTGCTGCTGCTGATGTTCAGAGTGAGAAAACTGCTACCCAGGATCGACTCTCTTCTACTTGTGACTTTCAGGGAAGTAGAAATTTGCAGTCTCATAATCTCATTAGTAATGGTGACCATAAGCTTCCTATTCCTGGGAATTTATTGGACCATGTTGAAGCTGTCAGCAACATCCAGGGTTATCCATTGCAAGTGCCGATTAAGAAAGAAGTGAATAGGGATATGAAAGGGAGCAGTTCTGCAACTGAGTTGCCTCTTCTTTCCCAAAAAAGTTGA 4200 0.441 MPPEPLPWDRKDFFKERKHERSESVGSVARWRDSSHHHRGADFHRWGSADFRRPPGHGKQGGWHLFSEESGHGYAISRSGDKMPEDDSRPSVLRSDGKYGRSSRENRGPFGQRDWRGHSWETANGSVNFSRRLPDVNNDQRSVDDAFAYSSHPHSDFVNTWDPRHLKDQHDKVGCVNGLGAGPSCDRENSLGSMDWKPLKWTRSGSLSSRGSGFSHSSSSRSMGGADSNEAKAELQPKNVTANESYSEEAAACMTFSAPSEDATSRKKPRLNWGEGLAKYEKKKVEGPDVSANNDGPVLSGSNMEPCTFLSPSLVDKSPKVAGSLDCASPATPSSVACSSSPGVDDKLFGKIANVDNDASNLTGSPGPGSQDYLQRFSFNLEKLDIDSLNNLNSSIIELIQSDDSSFVNSGIVKSTAMNKLLIWKADISKVLETTESEIDSLENELKSLRSESGDRCLCPGGLGSQLVGNNEKSFEEPVGVSDEAARPEPLKIVSSNDPNTEKMPLSTNIHSGEEEDIDSPGSATSKLVEPLPLAKAVSSCDTRRYDNLSGDMDALQSTSMKCLVPCITSKYASVSASGDRNTSSEVTDSRIASSDASLCSSAGDCLYENVISSNKELAKTACGLFSKLLPNGCCEIGNTGDSSDSCSQAFIMEKFAEKKRFARFKERVIVLKFNALHHLWKEDLRMMSIRKCRPKSHKKHELSVRTTCNGNQKNRSSNRSRYSFPARNHLSLVPTSEMINFTSKMLSESPVKVHRNALKMPALILDEKMTISKFVSSNGLVEDPLAIEKERAMINPWTPEEREIFLEKFVAFGKDFRKIASFLDHKTTADCVEFYYKNHKSDCFEKLKKHNFDKLGKPFSTKNDLVASSKKWNREAASLEILSAASVMADGLACNRRMRAGSFLIGGYNNVKISRGEESSRERSSSFDMLWDEREAFEALSLCATRSVEPLEGNRDRKFLKVCKQPLTPDATQNVDDGSCSDESCGEMDPSDWTDDEKAAFIQAVSSFGKDFIKIARCVGTRSPEQCKVFFSKARKCLGLDLVRPIPQNVGSPANDDANGGGSDTDDACVVETGSVVGTDKSGTKTDEDLPSSVVNTDHDESDPVEARDLSAELNELEDIDGTAIDHEDANLVSDACATSGEPKLGVDGSEAVLCNLDKSGSVSAQAAMIMSDSVEGGEERANEVGGAAALDTIEPYESNSAGEDRLVSEVSSGGLGNELERQSLSLPLCPDDRDDKLVGTGGVAELKISVQGSCTATANTSLSSVGNSCSGLSFDTERKHVSLRKLHIPALYMEDRHATANSVSQNTAAADVQSEKTATQDRLSSTCDFQGSRNLQSHNLISNGDHKLPIPGNLLDHVEAVSNIQGYPLQVPIKKEVNRDMKGSSSATELPLLSQKS* 1400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1017 1399 MobiDBLite consensus disorder prediction 469 526 - -
Dod06g1017 1399 Gene3D - 955 1046 - -
Dod06g1017 1399 MobiDBLite consensus disorder prediction 701 723 - -
Dod06g1017 1399 MobiDBLite consensus disorder prediction 202 226 - -
Dod06g1017 1399 MobiDBLite consensus disorder prediction 79 114 - -
Dod06g1017 1399 MobiDBLite consensus disorder prediction 706 723 - -
Dod06g1017 1399 Coils Coil 425 452 - -
Dod06g1017 1399 MobiDBLite consensus disorder prediction 973 993 - -
Dod06g1017 1399 CDD SANT 994 1032 IPR001005 -
Dod06g1017 1399 SMART sant 990 1038 IPR001005 -
Dod06g1017 1399 SMART sant 794 842 IPR001005 -
Dod06g1017 1399 SUPERFAMILY Homeodomain-like 991 1040 IPR009057 -
Dod06g1017 1399 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 1386 - -
Dod06g1017 1399 MobiDBLite consensus disorder prediction 1380 1399 - -
Dod06g1017 1399 MobiDBLite consensus disorder prediction 1047 1106 - -
Dod06g1017 1399 SUPERFAMILY Homeodomain-like 781 841 IPR009057 -
Dod06g1017 1399 MobiDBLite consensus disorder prediction 494 508 - -
Dod06g1017 1399 Pfam Myb-like DNA-binding domain 797 838 IPR001005 -
Dod06g1017 1399 Pfam Myb-like DNA-binding domain 992 1033 IPR001005 -
Dod06g1017 1399 MobiDBLite consensus disorder prediction 1385 1399 - -
Dod06g1017 1399 MobiDBLite consensus disorder prediction 1 119 - -
Dod06g1017 1399 ProSiteProfiles SANT domain profile. 992 1040 IPR017884 -
Dod06g1017 1399 Gene3D - 774 846 - -
Dod06g1017 1399 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 1386 - -
Dod06g1017 1399 ProSiteProfiles SANT domain profile. 793 844 IPR017884 -
Dod06g1017 1399 MobiDBLite consensus disorder prediction 8 52 - -
Dod06g1017 1399 MobiDBLite consensus disorder prediction 202 244 - -
Dod06g1017 1399 MobiDBLite consensus disorder prediction 1083 1106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1017 Dod-Chr6 12962083 12969915 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dod06g1017 Myb_DNA-binding 2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1017 - - adu:107467909 1951.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g1017 06 12962083 12969915 Dod06g1017 06 12962083 12969915 ECH