Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1007 ATGACGAAGGAGAGAGGGGCAGTAATAGGCCTAGATACTGTCGTGTGTTTTATTCCTGACAATGTGTATAAAAAGAGTGTCGATGACAAGATATTTACTCCCTTAAGGGAGACCAGAGAAAGCGACAGCGAAGGAGACTGTTACTATTCTGTTACAACATGGTTGTCTTCGTTTGTTTTGTTTTGGGACGCTGCGTTCACAATTGGAGGTATAGGGGCCCCACTTATCCTGACACCGAATCCTGCCTGTAATGTTAACTTTTCTCCTTTCCTTCCCTCCTTTTTGTCCTCTCTTTTCTCTTCCACCGGGCAACTACCTTCATTTTGCAGAGACATCTCTTTTGATTCTCATGCAAAGTTCAAGGAAGTGCACATGGGGAGGAAAGGGAATTGGTTTTCTTCAGTGAAGAAAGTCTTTGGCTCTGATTCAAAAAAGGATCAGAAACACATCAGCCATAGCCATAGGTCAAAGCTAGCATGTTTTGGGCATCATGGGCACCATCATGAAGAGGGACCTGAAGGGGCACAAATTGCTGCTGTTCCCTCTCTTCCAAGTAGGAGAGAAACCAAACCAGTTGAGGAGGAGAATGAACAGAACAAGCAGACTTTTTCTTTGGTTTTGGCCACCGCTGTTGCCGCAGGTGCTGCTGTTGCTGCAGCTGCTGAGGTTGCACGACTCAAGAGTGTGCCTCGTTACCCTGAGAAAATGAAGGAAGAGGTTGCAGCTACCAAGATTCAGACGGCTTTCCGTGGATATTTGGCAAGGAGAAAATTGCGTGGGTTGAGAGGTTTGGCAAGGTTGAAAACATTGATACAAGGGCAATCTGTTAAACGGCAATCAGCTACCACCTTGCAATGCATGCAAACTCTTTCAAAACTTCAGTCTCAGGTTCGTGCGAGGAGGATTAGGATGTCTGAGGAGAACCAGGCTCTTCAGCGCCAACAGCAGCAGAAACGTGAGAAGGAGATTGAGAAGTTGCAAGCTTCTCAAGAAAAATGGGATGATAGCTTGCAATCAAAAGACCAAATTGAAGCAAGGTTGTTGAACAAGCAAGTAGCTGCTATGAGAAGGGAGAAGGCTTTGGCCTACTCAATGACACATCAGCAAACGTGGAGGAACCCTTCAAAGTCTGCAAATGCCACATTTATGGATCCAAACAATCCCCACTGGGGCTGGAACTGGCTGGAGAGATGGATGGCTGCAAGGCCATGGGAGGGCCAAAGCACTTTGCAACACAATGAACATGCCCCAGCACAAAGTGCAGCAAGAAGTACCATGTCAGTTGGGGAAATCACCAAATTATACTCTCTCCGAGATCAGGACTATGATCCTAATAAGAACAACACCCCTTCTGGCCCTAAAGCCAGCCGTGCTTGCAGCCTCAACTTGCCTTCAACACCAGCCTCATCAAAGTCCTCACCTGCTATTGCAAAGGCTAATAAGGCATCATCCCCAAAGGTTGGTTCATGGGGTGGTAATGATGATTCCAAGAAGAACTTATTTGGCATAAAGCCAGAGAGCAACCGAAGGCACAGCATTGCAGTGTCACCAGTGAGGAATGATGAGAGCCTTGCAAGCTCACCTGCCACAGCATCCCCAGGGGTAGCAGCAACAAAGGCCAAGTCCAAAGTTCCAAGTAGTCCATCTGGGGTTCACAAGAAAAGCGGTGGAACAACTGATAAAAAAGAAGGTGCTGTTTCTGCAAAGAAGAGGCTTTCTTTACCATCTTCTCCAGCTGCTTCAAGAAGGCATTCTGTTCCAAGCAAGGTGGGAATGGCTTCCAGTAATAAGAATGGTGCTGCTAATTCTGAGGAGAAAGTGAAAGTGAGAAATGAAGGGAGCAGGTAG 1848 0.4675 MTKERGAVIGLDTVVCFIPDNVYKKSVDDKIFTPLRETRESDSEGDCYYSVTTWLSSFVLFWDAAFTIGGIGAPLILTPNPACNVNFSPFLPSFLSSLFSSTGQLPSFCRDISFDSHAKFKEVHMGRKGNWFSSVKKVFGSDSKKDQKHISHSHRSKLACFGHHGHHHEEGPEGAQIAAVPSLPSRRETKPVEEENEQNKQTFSLVLATAVAAGAAVAAAAEVARLKSVPRYPEKMKEEVAATKIQTAFRGYLARRKLRGLRGLARLKTLIQGQSVKRQSATTLQCMQTLSKLQSQVRARRIRMSEENQALQRQQQQKREKEIEKLQASQEKWDDSLQSKDQIEARLLNKQVAAMRREKALAYSMTHQQTWRNPSKSANATFMDPNNPHWGWNWLERWMAARPWEGQSTLQHNEHAPAQSAARSTMSVGEITKLYSLRDQDYDPNKNNTPSGPKASRACSLNLPSTPASSKSSPAIAKANKASSPKVGSWGGNDDSKKNLFGIKPESNRRHSIAVSPVRNDESLASSPATASPGVAATKAKSKVPSSPSGVHKKSGGTTDKKEGAVSAKKRLSLPSSPAASRRHSVPSKVGMASSNKNGAANSEEKVKVRNEGSR* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1007 615 Gene3D iswi atpase 235 262 - -
Dod06g1007 615 MobiDBLite consensus disorder prediction 307 335 - -
Dod06g1007 615 MobiDBLite consensus disorder prediction 578 602 - -
Dod06g1007 615 MobiDBLite consensus disorder prediction 519 533 - -
Dod06g1007 615 ProSiteProfiles IQ motif profile. 238 266 IPR000048 GO:0005515
Dod06g1007 615 Coils Coil 301 332 - -
Dod06g1007 615 Pfam IQ calmodulin-binding motif 241 259 IPR000048 GO:0005515
Dod06g1007 615 PANTHER IQ-DOMAIN 5-RELATED 125 604 - -
Dod06g1007 615 SMART iq_5 237 259 IPR000048 GO:0005515
Dod06g1007 615 MobiDBLite consensus disorder prediction 441 479 - -
Dod06g1007 615 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 125 604 - -
Dod06g1007 615 MobiDBLite consensus disorder prediction 436 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1007 Dod-Chr6 12868621 12875993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1007 125 600 IQD Protein Family AT5G03040 42.974 2.48e-104 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1007 - - gmx:100807725 498.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g1007 06 12868621 12875993 Dod06g1007 06 12868621 12875993 ECH