Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1004 ATGGATTTCAAAGTGCAAGCCCCCACAACAATAACCCCTTCTTCTTCTTCATCAATCCCAATCCATGTTCCCACTACTATGTTCTCAAACTCTCCTCCATCTTCATCTTCACCTCCTTCTTCACAGTCTCCCTCACCTCCTTTTCCTTCATCCTCTCAGTGTTCTCCTTCCTCTGCTGCTGCTGCTCCACCGCCACCGCCGCCGTCTCCCCCGCCGCCCGTGGTGGTCAGCCCTTGTGCTGCCTGCAAGATCCTCCGCCGCAGGTGCGTGGAGAAGTGTGTCCTGGCTCCTTACTTCCCTCCAACTGACCCACTCAAGTTCACCATTGCACACAGAGTCTTTGGAGCCAGCAATATCATCAAGTTCTTGCAGGAACTGCCGGAATCTCAGAGAGCAGATGCCGTGAGCAGCATGGTTTATGAAGCAAATGCAAGGATTAGAGACCCAGTTTATGGCTGTGCAGGTGCCATATGCCAACTCCAAAAGCAAGTTAGCGAGCTACAAGGACAGCTTGCAAAAGCACAAGCTGAGCTAGTCAACATGCAGTGCCAACAAGCCAATTTGGTTGCACTAATTTGCATGGAAATGAGTCAATCACAGGACCAGCACATGATTCAGCCTCAGCCTCATGTTGATATGAGCTGCTTCATAGATGACAACAGTCTTGCATCTGCTTGGGAGCCTCTTTGGACATGA 696 0.5072 MDFKVQAPTTITPSSSSSIPIHVPTTMFSNSPPSSSSPPSSQSPSPPFPSSSQCSPSSAAAAPPPPPPSPPPPVVVSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEANARIRDPVYGCAGAICQLQKQVSELQGQLAKAQAELVNMQCQQANLVALICMEMSQSQDQHMIQPQPHVDMSCFIDDNSLASAWEPLWT* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1004 231 MobiDBLite consensus disorder prediction 1 72 - -
Dod06g1004 231 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 65 226 - -
Dod06g1004 231 Coils Coil 157 184 - -
Dod06g1004 231 MobiDBLite consensus disorder prediction 7 36 - -
Dod06g1004 231 MobiDBLite consensus disorder prediction 37 51 - -
Dod06g1004 231 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 65 226 - -
Dod06g1004 231 Pfam Lateral organ boundaries (LOB) domain 78 175 IPR004883 -
Dod06g1004 231 ProSiteProfiles LOB domain profile. 77 178 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1004 Dod-Chr6 12824241 12825983 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1004 74 231 AS2 family AT1G07900 70.552 8.19e-78 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Dod06g1004 LOB 5.7e-41 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g1004 06 12824241 12825983 Dod06g1004 06 12824241 12825983 ECH