Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1000 ATGGACCAAAGAAGACGGGCAGCCACTGTTGGAATAGGCAGCCCGTCCGCGCCCACAGTGCTTCTAGAACTATCTCGTCCTCCTCGCTGTGTCTCTTCCTCTCCCCCACTGTTGTGGTACTTGATTGCTGCTGATTGTCTTCCTGTACTGATAAAAAGTTGTATTGTGGTCGGTTTCACATCAGATCTAGATACAGTTATGTCCGGCGACACAAATTGCACCGTTTACATAGGCAATTTGGATGAGAGGGTCACAGACAGGGTCTTGTATGATATATTAATTCAAGCAGGACGTGTGGTAGACTTGCACATTCCAAAAGATAAGGAATCAGAGAAACCAAAGGGTTTTGCCTTTGCAGAATATGAAACAGAGGAGATTGCAGACTATGCTGTCAGGCTCTTCTCTGGCCTTGTAACACTCTACAACAGAACACTGAAGTTTGCGATATCTGGGAAAGACAAAACCCCTAATGGTTCTACAGCACTTACACCCACGTTCAATTCTTCTCAAAGACCAAGGCCTCACCCAGTACCATTTAATAACTCAGAATCTGCTAGGCTATCAACACCGGACCGATTTTCAGATCATTCAGGAAATTATTCCCAAGTTCCTTCTCGTGTAAGTGATCAACCTAGTGGGCGAGGATCTCACCAGAGTGGCAACAATTATGAATACAGTCGTAGAGCTTTTGGAGCTACGTTGGATAGCATTAGCCGTTCTAGGTCACGCCGCTAG 735 0.4571 MDQRRRAATVGIGSPSAPTVLLELSRPPRCVSSSPPLLWYLIAADCLPVLIKSCIVVGFTSDLDTVMSGDTNCTVYIGNLDERVTDRVLYDILIQAGRVVDLHIPKDKESEKPKGFAFAEYETEEIADYAVRLFSGLVTLYNRTLKFAISGKDKTPNGSTALTPTFNSSQRPRPHPVPFNNSESARLSTPDRFSDHSGNYSQVPSRVSDQPSGRGSHQSGNNYEYSRRAFGATLDSISRSRSRR* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1000 244 MobiDBLite consensus disorder prediction 153 226 - -
Dod06g1000 244 MobiDBLite consensus disorder prediction 152 244 - -
Dod06g1000 244 SMART rrm1_1 74 148 IPR000504 GO:0003723
Dod06g1000 244 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 75 146 IPR000504 GO:0003723
Dod06g1000 244 SUPERFAMILY RNA-binding domain, RBD 68 146 IPR035979 GO:0003676
Dod06g1000 244 Gene3D - 66 159 IPR012677 -
Dod06g1000 244 PANTHER RNA BINDING MOTIF RBM PROTEIN -RELATED 67 244 - -
Dod06g1000 244 PANTHER OS01G0876500 PROTEIN 67 244 - -
Dod06g1000 244 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 73 152 IPR000504 GO:0003723
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1000 73 153 Eukaryotic Initiation Factors Gene Family AT1G49760 28.395 2.66e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1000 K12831 - gmx:100784532 310.071