Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0998 ATGGAAGATTCAGAGGAAGAGGAGCTTCTGAATCTTAGCCTTTCAGTTGCTGCTGATAGGGAGAGGAAAAAGAAGGGAAAGACAATTAAGGAAAACATTGCTTCTATGAGTAGTTGTCGTACTACTACTATGAGCTCCTATGAAGGGAAGATCTTTAGACTTCTCCAAATGAGGGATCACATGCTAAGACAAGACCACAGGAGGAAAGGAGTTGTTGAAGATGGGAATGGCCCTCCCTTGATCCATTTGCTTCTCGCAACAGCCACTTCTGTTGATGAGAACAACTTGGCCTCAGCTCTGGAGAATCTAACTGAACTTTACCAAACTGTTTCCCTAACAGGTGACTCAGTTCAGCGTGTTGTGGCCTATTTCTCTGATGGCTTGGCTGCAAGGCTTCTCACTAGGAAGTCACCATTCTATGACATGCTCATGGAGGAGCCAACAAGTGAGGAAGAGTTCCTTGCATTCACAGATCTCTATAAGGTCTCACCATACTACCAATTTGCTCACTTCACAGCGAATCAGGCTATTTTGGAGGCCTTTGAGAGGGAGGAGGAGAGGAACAACGGTGCTCTTCATGTCATTGACTTTGATGTCTCCTATGGCTTCCAATGGCCTTCTCTTATTCAATCTCTTTCTGAGAAAGCCACCAGCGGCAACCGCATATCCCTCAGGGTAACTGGATTTGGGAAGAATCTTAAGGAACTTCAAGAAACTGAGTCTAGATTGGTTAGCTTCTCCAAGGGTTTTGGCAATCTTGTGTTTGAGTTCCAAGGGCTGCTGAGAGGGTCAAGAGTCATCAATTTAAGGAAGAAGAAGAATGAGACTGTTGCAGTGAACTTGGTCTCTTACTTGAACACTTTGAGTTGTTTCATGAAGATCTCTGACACATTGGAATTTGTCCATTCCCTTAGCCCCTCCATTGTTGTCTTGGTGGAACAGGAAGGTGGCAGCAGTCCTAGGACCTTCTTGCCAAGGTTCACAGACTCTTTGCCCTATTATGCAGCCATGTTTGATTCATTGGATGATTGCCTCCCACTTGAGAGCACTGAGAGGCTGAGGATTGAGAAGAAGCTTCTTGGGAAGGAGATCAAGAGCATGCTCAACTATGACATGGATGGTGTCGATTGCCCAAAGTATGAGAGGATGGAGACATGGAAGGCAAGAATGGAGAATCATGGGTTTGTTGGAACCAAGATAAGCTCAAAGTCTATGATCCAAGCAAAGCTGCTTCTGAAGATGAGGACACAGTATTGTCCACTCCAGTTTGAGGAAGAACGAGGTGGGGGTTTCAGGGTTTCTGAGAGAGATGAAGGAAGGGCTATCTCTTTAGGGTGGCAAGAAAGGTTTCTGCTTACTATCTCAGCTTGGCAACCTGTCTCTTAG 1386 0.4545 MEDSEEEELLNLSLSVAADRERKKKGKTIKENIASMSSCRTTTMSSYEGKIFRLLQMRDHMLRQDHRRKGVVEDGNGPPLIHLLLATATSVDENNLASALENLTELYQTVSLTGDSVQRVVAYFSDGLAARLLTRKSPFYDMLMEEPTSEEEFLAFTDLYKVSPYYQFAHFTANQAILEAFEREEERNNGALHVIDFDVSYGFQWPSLIQSLSEKATSGNRISLRVTGFGKNLKELQETESRLVSFSKGFGNLVFEFQGLLRGSRVINLRKKKNETVAVNLVSYLNTLSCFMKISDTLEFVHSLSPSIVVLVEQEGGSSPRTFLPRFTDSLPYYAAMFDSLDDCLPLESTERLRIEKKLLGKEIKSMLNYDMDGVDCPKYERMETWKARMENHGFVGTKISSKSMIQAKLLLKMRTQYCPLQFEEERGGGFRVSERDEGRAISLGWQERFLLTISAWQPVS* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0998 461 Pfam GRAS domain family 80 458 IPR005202 -
Dod06g0998 461 PANTHER OSJNBA0084A10.13 PROTEIN 7 458 - -
Dod06g0998 461 ProSiteProfiles GRAS family profile. 71 458 IPR005202 -
Dod06g0998 461 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 7 458 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0998 Dod-Chr6 12696301 12697686 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0998 83 458 GRAS Transcription Factor Family AT2G04890 34.015 4.33e-56 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dod06g0998 GRAS 4.5e-90 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0998 - - gmx:100813979 786.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g2792 02 60205538 60206932 Dod06g0998 06 12696301 12697686 PCT