Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0989 ATGGGGGAATCCAACTCCAACAAGGATAACCAACATGGAACTTGCTCTCAATTACAAAGTGAGGATGGTGCTTGCCTCTCAGCAATGCTGCTTATGACTAATCTGGTTTATCCTGCAGTGTTCAACGCAGCTATTGAGCTCAACTTGTTTGAGATCATAGCTAAGGCAACACCACCTGGTGCATTCTTGTCATCTTCTGAAATTGCTTCTAGGCTGCCAACAACACAACCCTCTGACCTCCCTAATAGGCTTGAGCGCATGCTGCGTTTGCTTGCTAGTTACTCTATTCTTACATGTACTACTCGTGCTGGTGAGAATGGTGCCTCTGAGATAGTCTATGGGCTCTCACATGTTGGGAAATACTTTGTTCCTGATGAAAACAGGGGATGCTTGGCTTCATTCATAACATTTATGTGCTATCCAACATTGTTTCCTGTTTGGATGAACTTTAAAGAAGCAGTGGTTGATGCTGACACAGATCTCTTCAAGAAAATTCATGGAATAACCGCGTATGAGTACATGGAAAAAGATCCAAAAATGAACCACATTTTTAACAAGTCAATGGCTGATTGGAAATCAAAAGGCACCAATCCCAGAGCATCCGCTAGCAGATACTCCAAGGAGCTAACATGGCTGGGGGATCACCAAGCAGCATCAAATCAGGATCCTTGTAAACGCCAATTAAGAAGAGCCATCTGA 699 0.4349 MGESNSNKDNQHGTCSQLQSEDGACLSAMLLMTNLVYPAVFNAAIELNLFEIIAKATPPGAFLSSSEIASRLPTTQPSDLPNRLERMLRLLASYSILTCTTRAGENGASEIVYGLSHVGKYFVPDENRGCLASFITFMCYPTLFPVWMNFKEAVVDADTDLFKKIHGITAYEYMEKDPKMNHIFNKSMADWKSKGTNPRASASRYSKELTWLGDHQAASNQDPCKRQLRRAI* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0989 232 Gene3D - 4 122 IPR036388 -
Dod06g0989 232 Pfam Dimerisation domain 40 92 IPR012967 GO:0046983
Dod06g0989 232 SUPERFAMILY "Winged helix" DNA-binding domain 21 126 IPR036390 -
Dod06g0989 232 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 29 232 IPR016461 GO:0008168
Dod06g0989 232 PANTHER O-METHYLTRANSFERASE 1 191 IPR016461 GO:0008168
Dod06g0989 232 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 191 - -
Dod06g0989 232 Gene3D Vaccinia Virus protein VP39 123 215 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0989 Dod-Chr6 12588927 12597924 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0989 20 190 Monolignol Biosynthesis Gene Families AT5G54160 38.596 1.56e-31 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0989 - - gmx:100787536 269.24