Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod06g0987 | ATGGAGAACCTCAAGTTCGCATCTTTGGCACCGTCTCCTCCTTCTCCACCCTCCGGGATGCTGGGAAAACAAGTGAATTCCCCTCTATTTGCTGTTGATTCTGCAGCAAAGTTCTGCCATTGCAAGGCTGATCATGCTGCATCATCATCATCATCATCAAGTATTCCACTGTCAACTACTATGTCTTATACTAGATTTTCATCAAGTGCACCAAAAGCAAAATGGGCCTCAAATCTTTCCACGAAGCATAGGATATTACATTCAACTGCACAAATAGAAAACATAATCACAAGTGATGAAGATCAGAGTATGTGGGAAGCCTGTAGACTAGCCCTTTCTGCATTTAACTTCAGCGATGAAGAAAAGGACAAGATACTTGGAAAAGCATTTGGCCTTGTTCATTCCCCTTACTGGGGAGAAGAACGTAAGACAGAAGTTCCCAAATATGAGACAGTAAATGGGGTATTAGACTATCTGAGGAGTTTAAATCTTTCTGATGATGATCTGTCCAAGTTGCTCAAAAAGTTTCCAGAAGTTCTTGGATGTAAGTTGGAGGAAGAATTGAAAACTAATGTAAAGATCCTGGACGAGCAGTGGGGTATTGAAGGAAAATCTCTTAGGAAACTCCTTCTTCGAAATCCGAAAGTTTTGGGTTATAATGTTGATTGTAAGGGGGACTGTATGGCACAATGCACTCGATGCTGGGTTCGTTTCTAG | 717 | 0.4142 | MENLKFASLAPSPPSPPSGMLGKQVNSPLFAVDSAAKFCHCKADHAASSSSSSSIPLSTTMSYTRFSSSAPKAKWASNLSTKHRILHSTAQIENIITSDEDQSMWEACRLALSAFNFSDEEKDKILGKAFGLVHSPYWGEERKTEVPKYETVNGVLDYLRSLNLSDDDLSKLLKKFPEVLGCKLEEELKTNVKILDEQWGIEGKSLRKLLLRNPKVLGYNVDCKGDCMAQCTRCWVRF* | 239 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod06g0987 | 238 | PANTHER | MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN | 19 | 237 | - | - | |
Dod06g0987 | 238 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Dod06g0987 | 238 | Gene3D | Transcription termination factor 3, mitochondrial | 77 | 234 | IPR038538 | - | |
Dod06g0987 | 238 | PANTHER | CGI-12 PROTEIN-RELATED | 19 | 237 | IPR003690 | GO:0003690|GO:0006355 | |
Dod06g0987 | 238 | SMART | mt_12 | 170 | 202 | IPR003690 | GO:0003690|GO:0006355 | |
Dod06g0987 | 238 | Pfam | mTERF | 156 | 220 | IPR003690 | GO:0003690|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod06g0987 | Dod-Chr6 | 12567903 | 12571238 | Proximal |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | mTERF | Dod06g0987 | mTERF | 1.8e-08 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod06g0987 | - | - | aip:107619032 | 339.732 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Dod06g0987 | 06 | 12567903 | 12571238 | Dod06g0987 | 06 | 12567903 | 12571238 | ECH |