Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0987 ATGGAGAACCTCAAGTTCGCATCTTTGGCACCGTCTCCTCCTTCTCCACCCTCCGGGATGCTGGGAAAACAAGTGAATTCCCCTCTATTTGCTGTTGATTCTGCAGCAAAGTTCTGCCATTGCAAGGCTGATCATGCTGCATCATCATCATCATCATCAAGTATTCCACTGTCAACTACTATGTCTTATACTAGATTTTCATCAAGTGCACCAAAAGCAAAATGGGCCTCAAATCTTTCCACGAAGCATAGGATATTACATTCAACTGCACAAATAGAAAACATAATCACAAGTGATGAAGATCAGAGTATGTGGGAAGCCTGTAGACTAGCCCTTTCTGCATTTAACTTCAGCGATGAAGAAAAGGACAAGATACTTGGAAAAGCATTTGGCCTTGTTCATTCCCCTTACTGGGGAGAAGAACGTAAGACAGAAGTTCCCAAATATGAGACAGTAAATGGGGTATTAGACTATCTGAGGAGTTTAAATCTTTCTGATGATGATCTGTCCAAGTTGCTCAAAAAGTTTCCAGAAGTTCTTGGATGTAAGTTGGAGGAAGAATTGAAAACTAATGTAAAGATCCTGGACGAGCAGTGGGGTATTGAAGGAAAATCTCTTAGGAAACTCCTTCTTCGAAATCCGAAAGTTTTGGGTTATAATGTTGATTGTAAGGGGGACTGTATGGCACAATGCACTCGATGCTGGGTTCGTTTCTAG 717 0.4142 MENLKFASLAPSPPSPPSGMLGKQVNSPLFAVDSAAKFCHCKADHAASSSSSSSIPLSTTMSYTRFSSSAPKAKWASNLSTKHRILHSTAQIENIITSDEDQSMWEACRLALSAFNFSDEEKDKILGKAFGLVHSPYWGEERKTEVPKYETVNGVLDYLRSLNLSDDDLSKLLKKFPEVLGCKLEEELKTNVKILDEQWGIEGKSLRKLLLRNPKVLGYNVDCKGDCMAQCTRCWVRF* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0987 238 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 19 237 - -
Dod06g0987 238 MobiDBLite consensus disorder prediction 1 22 - -
Dod06g0987 238 Gene3D Transcription termination factor 3, mitochondrial 77 234 IPR038538 -
Dod06g0987 238 PANTHER CGI-12 PROTEIN-RELATED 19 237 IPR003690 GO:0003690|GO:0006355
Dod06g0987 238 SMART mt_12 170 202 IPR003690 GO:0003690|GO:0006355
Dod06g0987 238 Pfam mTERF 156 220 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0987 Dod-Chr6 12567903 12571238 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Dod06g0987 mTERF 1.8e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0987 - - aip:107619032 339.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0987 06 12567903 12571238 Dod06g0987 06 12567903 12571238 ECH