Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0976 ATGGAATCGTGTGTACCTCCAGGATTCAGATTTCATCCAACAGAAGAAGAACTTGTGGGGTATTACCTCAAGAGGAAGATAAACTCGCTAAAAATCGATCTAGATGTTATAGTTGAGATCGATCTTTACAAAATGGAACCATGGGACATACAAGATAGATGCAAGCTAGGATATGAGGAGCAGAATGAGTGGTACTTTTCAGCCATAAAGACAAGAAGTATCCTACAGGAAGAAGGATGGGTTGTGTGCCGAGCATTTAGAAAGCCTAGTCCAAGTCACAGGCAAGGCTTTGACCCATGGTGTAGCAATCAACAACACTACTTCAGAGATCAAAGCTATGCAAGGCCCTTATCAATCACAGATATTTTAACTGAAACTCATCATGTGCTGCACCCTGCTGAAGGTACAAGTTTTAGTACTCACCCCTTTACCTCGGATCAGCAACAACAACAACAGCAGTTTCTATCCAATTCCAACCACACTATTGCGATGGACAAACAATTCATTGAGCTTCCACAGCTAGATAGCCCCACAGCAAGTTTGGCAATGAAAGAACAACATCACAATAATGGCCTAACAAATGAAGAATATTGCAGTGATGAGAGGAGCAACAATAACAACAATGGACAAGGAATTGATTGGAAGAGCTTGGACAACTTGCTGTTTGCATCACAATTGACGGATACAGCTAATTACTTTTCACATCCAAACATGCCCTTGATGATGATACCACATAGCAATGAGCTACAAGCTCATCATCAAAACCAAGCTAGTCATGTCCTAGGATGCTTTCCTGATTCATAA 804 0.4117 MESCVPPGFRFHPTEEELVGYYLKRKINSLKIDLDVIVEIDLYKMEPWDIQDRCKLGYEEQNEWYFSAIKTRSILQEEGWVVCRAFRKPSPSHRQGFDPWCSNQQHYFRDQSYARPLSITDILTETHHVLHPAEGTSFSTHPFTSDQQQQQQQFLSNSNHTIAMDKQFIELPQLDSPTASLAMKEQHHNNGLTNEEYCSDERSNNNNNGQGIDWKSLDNLLFASQLTDTANYFSHPNMPLMMIPHSNELQAHHQNQASHVLGCFPDS* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0976 267 ProSiteProfiles NAC domain profile. 5 170 IPR003441 GO:0003677|GO:0006355
Dod06g0976 267 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 72 - -
Dod06g0976 267 PANTHER NAC DOMAIN-CONTAINING PROTEIN 30 74 240 - -
Dod06g0976 267 Pfam No apical meristem (NAM) protein 6 72 IPR003441 GO:0003677|GO:0006355
Dod06g0976 267 SUPERFAMILY NAC domain 3 72 IPR036093 GO:0003677|GO:0006355
Dod06g0976 267 Gene3D NAC domain 14 74 IPR036093 GO:0003677|GO:0006355
Dod06g0976 267 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 74 240 - -
Dod06g0976 267 PANTHER NAC DOMAIN-CONTAINING PROTEIN 30 4 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0976 Dod-Chr6 12415058 12417808 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0976 1 267 NAC Transcription Factor Family AT1G71930 35.503 3.21e-43 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod06g0976 NAM 3.5e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0976 - - gmx:100812904 253.832