Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0969 ATGCCAACACCCACACCAACAACAACACCACAAAGAGGAGCGTTTGGTGGTGTAGAAACTCCCAATGGAGACTCATCCGACTCTCACGATCCACCCAAACACTGCCCTCGAGAATCGCGTGACTCCCCTCCTTTAATGTCTCCTTCTTACCCAATCACTCTCAAGTTCATGGACGTGGGCTACCGAGTGAAGATAGAGAACAAGCAAGGAAAAGGAGGGTGCATTAAGAGACTGTTTGCCGCTCACGACTCATCACCACCGTCGAATCAAAGATCAACGGTGCAAGAGCGAACAATCCTGAACGGGGTAACAGGAATAGCGTACCCGGGGGAGATCCTAGCCATCCTGGGCCCATCAGGGAGCGGGAAATCGACGCTCCTAAACGCCCTAGCAGGGAGGCTCCATGGACACGGCCTCACGGGAACAATCCTCGCCAACTCGGCCAAACTCAGCAAACCGATTCTCCGCCGAACCGGGTTCGTGACTCAGGACGACGTGCTCTACCCGCACCTCACCGTCCGCGAGACCCTAGTGTTCTGCTCCATGCTCCGCCTCCCGAGATCGCTGCCGCGCGCGGCGAAGGTTGCCGCGGCGGAGTCGGCGATGGCGGAGCTGGGGCTGGGGAAGTGCGAGGACACCATCATCGGGAACAGCTTCGTCCGCGGCGTCTCCGGCGGGGAGAGGAAGCGCGTGAGCATCGCGCACGAGATGCTGGTGGACCCGAGCCTGCTGGTTCTGGACGAGCCGACGTCGGGCCTGGACTCCACGGCGGCGCACCGCCTCCTGTCGACTCTAGGATCGCTGGCGAAGAAGGGGAAGACGGTGGTGACGTCGGTGCACCAGCCGTCGAGCCGCGTCTACCAGATGTTCGACAAGGTGCTCGTCCTCTCCGAAGGGCACTGCCTCTTCTTCGGAAGAGGAAGCGACGCCATGAAGTACTTTGAGTCGGTCGGGTTCGCGCCGTCGTTCCCGATGAATCCGGCGGATTTTCTGCTCGATCTCGCTAACGGTGTTTGCCATGTTGATGGTCTAAGTGAAAAGGACAGGCCAAACATAAGGCAGAACCTAGTTCGTTCATACAACACAACACTAGCTCCCAAGGTAAAAGCTGCCTGCATGGACACTGCAAGTGTTCCCACCAAAAACACTCATCAGTCTTTGGGAACCAGCTCCTCCAAAGAACGTAGATATAGTGACAGGGTCAGCTTCTTAGATTGGTTCAACCAATTCAGCATCCTGCTCCAAAGAAGCCTCAAGGAAAGAAAGCACGAATCCTTCAACACTCTAAGGGTCTGCCAAGTCATTGCTGCAGCACTATTAGCTGGCCTAATGTGGTGGCACTCTGACTACCGGAACATTCAAGACAGGCTTGGCCTGCTTTTCTTCATTTCCATCTTCTGGGGTGTTTTCCCATCATTTAACTCAGTTTTTGCATTCCCCCAAGAACGTGCCATCTTCATGAAAGAAAGAGCTTCTGGAATGTACACACTGTCATCCTATTTCATGGCTAGAATTGTTGGAGACCTGCCAATGGAGCTTATTCTCCCCACAGTTTTCCTCCTTGTGACGTATTGGATGGGAGGATTGAAGCCTGATTTGGGGGCATTTTTCTTGACTTGGCTGGTTGTTATTGGATACGTGCTAGTCTCACAGGGTCTTGGCCTTGCTTTAGGTGCAGCAATAATGGATGCCAAACAGGCCTCAACCGTGGCAGCAGTGACAATGCTAGCATTTGTCTTAACAGGTGGATACTATGTCCACAAGGTGCCATCATGCATGGCATGGATTAAATACATATCCACAACCTTTTACTGTTATAGACTTCTGACTAGAATCCAGTATGGTGATGGCAAGAAGATCTCATACATATTGGGTTGCTATCATGGTGGTGGTGATAATGCAAGCTGCAAATTTATTGAAGAAGATGTGGTGGGGCAAATTGGAACTGTTGGAAGCATTGGGGTGTTGTTTCTCATGTTTGTGGGTTACAGATTATTGGCATACCTTGCATTGAGGCGCATCAAGAGCTGA 2031 0.5258 MPTPTPTTTPQRGAFGGVETPNGDSSDSHDPPKHCPRESRDSPPLMSPSYPITLKFMDVGYRVKIENKQGKGGCIKRLFAAHDSSPPSNQRSTVQERTILNGVTGIAYPGEILAILGPSGSGKSTLLNALAGRLHGHGLTGTILANSAKLSKPILRRTGFVTQDDVLYPHLTVRETLVFCSMLRLPRSLPRAAKVAAAESAMAELGLGKCEDTIIGNSFVRGVSGGERKRVSIAHEMLVDPSLLVLDEPTSGLDSTAAHRLLSTLGSLAKKGKTVVTSVHQPSSRVYQMFDKVLVLSEGHCLFFGRGSDAMKYFESVGFAPSFPMNPADFLLDLANGVCHVDGLSEKDRPNIRQNLVRSYNTTLAPKVKAACMDTASVPTKNTHQSLGTSSSKERRYSDRVSFLDWFNQFSILLQRSLKERKHESFNTLRVCQVIAAALLAGLMWWHSDYRNIQDRLGLLFFISIFWGVFPSFNSVFAFPQERAIFMKERASGMYTLSSYFMARIVGDLPMELILPTVFLLVTYWMGGLKPDLGAFFLTWLVVIGYVLVSQGLGLALGAAIMDAKQASTVAAVTMLAFVLTGGYYVHKVPSCMAWIKYISTTFYCYRLLTRIQYGDGKKISYILGCYHGGGDNASCKFIEEDVVGQIGTVGSIGVLFLMFVGYRLLAYLALRRIKS* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0969 676 Pfam ABC transporter 101 251 IPR003439 GO:0005524
Dod06g0969 676 Pfam ABC-2 type transporter 280 387 IPR043926 GO:0140359
Dod06g0969 676 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 26 674 - -
Dod06g0969 676 PANTHER ABC TRANSPORTER G FAMILY MEMBER 25 26 674 - -
Dod06g0969 676 CDD ABCG_EPDR 97 305 - -
Dod06g0969 676 MobiDBLite consensus disorder prediction 8 25 - -
Dod06g0969 676 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 94 316 IPR027417 -
Dod06g0969 676 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 54 323 IPR003439 GO:0005524
Dod06g0969 676 Pfam ABC-2 type transporter 409 613 IPR013525 GO:0016020|GO:0140359
Dod06g0969 676 MobiDBLite consensus disorder prediction 1 49 - -
Dod06g0969 676 MobiDBLite consensus disorder prediction 26 40 - -
Dod06g0969 676 SMART AAA_5 109 300 IPR003593 -
Dod06g0969 676 Gene3D - 88 317 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0969 Dod-Chr6 12329237 12336589 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0969 99 337 Calmodulin-binding Proteins AT2G36910 28.807 1.67e-13 72.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0969 06 12329237 12336589 Dod06g0969 06 12329237 12336589 ECH