Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0962 ATGGAGCCTCTCTCTTCCACCAAACACAACCACAACCACAACCACAACCATACCAAGCCTAATTCTCTTAGCGTAGAGAACCCGGCTCCGCTGGAGGCGAGTCCTCTACGTAAGCTCATCGTTGTGGCCTCCATCGCTGCCGGGATTCAGTTCGGGTGGGCTATACAGCTCTCCCTACTGACCCCCTACGTCCAGCTGCTCGGCATCTCGCACACATGGGCCCCCTTCATCTGGCTGTGCGGCCCAATAAGCGGGATGCTCGTGCAGCCAATAGTTGGCTACCACAGCGACCGCTGCACCTCCAAGTTCGGCCGCCGCCGTCCCTTCATCGCCGCCGGCGCATTGGCCGTCGCCATAGCCGTCTTCCTCATCGGTTACGCCGCCGACCTCGGCCACATGTTTGGCGACTCCTTAGCCAAGAAAACCCGCCCCCGCGCAATCGCCATTTTCGTCGTAGGGTTCTGGATCCTCGACGTGGCGAACAACATGCTCCAGGGACCTTGCCGTGCGCTCCTCGCCGACCTCTCCGCCGGCGACCAACGGAAAACGAGAACGGCAAACGCGTTCTTCTCGTTCTTCATGGCGGTCGGAAACGTCCTAGGCTACGCCGCCGGTTCCTACAGCGGCCTCCACAAGGTGTTCCCGTTCTCTAAGACGAAGGCCTGCGACGTGTACTGCGCGAATCTCAAAAGCTGCTTCTTCCTCTCAATCGCGCTTCTTCTCATTGTCGCCACCGCCGCGATGACCTACGTGAAGGAGAAAGCTCTCGCGCCGGAGAAGGCTTCCGGTGCCGAGGCGGAGGAGGAGGGGACACGTGGCGGGATGCCGTGCTTCGGGGAGTTATTCGGTGCGTTCAGGGAGCTGAAGAGGCCGATGTGGATCCTTTTACTGGTGACGTGTCTGAATTGGATCGCGTGGTTCCCGTTCTTGCTGTTCGACACTGATTGGATGGGGAGGGAAGTTTATGGTGGAAAAGTTGGGGAAGGTAAGGCGTACGCTAGGGGGGTGCGCGCGGGGGCGTTGGGTTTGATGTTGAATTCGGTGGTGCTTGGAGCGACGTCGTTAGGGGTTGAGGTTTTGGCGCGTGCTGTTGGGGGCGTGAAGAGGCTTTGGGGGATTGTGAATTTCCTTCTGGCGGTTTGTTTGGCTATGACGGTTTTGGTTACCAAGCTGGCCGAGCACTCGCGGCGGTTCGCGCCCGGCTCTCATGACCCGCTGCCGGCCTCCCGGCGGCGTTCAGGCTGGCGCGTTGGCTCTCTTCTCGGTTCTCGGAATCCCCCTTTCGATTACTTACAGCATACCCTTTGCTCTAGCATCTATATTCTCCAGCACATCAGGGGCAGGCCAAGGGTTATCTCTTGGAGTGCTCAATCTTGCAATAGTCATACCACAGATGGTTGTTTCTGTGATTAG 1413 0.5874 MEPLSSTKHNHNHNHNHTKPNSLSVENPAPLEASPLRKLIVVASIAAGIQFGWAIQLSLLTPYVQLLGISHTWAPFIWLCGPISGMLVQPIVGYHSDRCTSKFGRRRPFIAAGALAVAIAVFLIGYAADLGHMFGDSLAKKTRPRAIAIFVVGFWILDVANNMLQGPCRALLADLSAGDQRKTRTANAFFSFFMAVGNVLGYAAGSYSGLHKVFPFSKTKACDVYCANLKSCFFLSIALLLIVATAAMTYVKEKALAPEKASGAEAEEEGTRGGMPCFGELFGAFRELKRPMWILLLVTCLNWIAWFPFLLFDTDWMGREVYGGKVGEGKAYARGVRAGALGLMLNSVVLGATSLGVEVLARAVGGVKRLWGIVNFLLAVCLAMTVLVTKLAEHSRRFAPGSHDPLPASRRRSGWRVGSLLGSRNPPFDYLQHTLCSSIYILQHIRGRPRVISWSAQSCNSHTTDGCFCD* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0962 470 SUPERFAMILY MFS general substrate transporter 37 388 IPR036259 -
Dod06g0962 470 PANTHER SUGAR TRANSPORTER 19 397 - -
Dod06g0962 470 CDD MFS_SLC45_SUC 39 388 - -
Dod06g0962 470 TIGRFAM GPH_sucrose: sucrose/H+ symporter 35 411 IPR005989 GO:0005887|GO:0008515|GO:0015770
Dod06g0962 470 MobiDBLite consensus disorder prediction 1 27 - -
Dod06g0962 470 Gene3D MFS general substrate transporter like domains 33 400 IPR036259 -
Dod06g0962 470 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 19 397 - -
Dod06g0962 470 Pfam MFS/sugar transport protein 46 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0962 Dod-Chr6 12279731 12283146 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0962 4 467 Sucrose Transporter Gene Family AT1G66570 60.213 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0962 K15378 - gmx:547679 692.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0962 06 12279731 12283146 Dod06g0962 06 12279731 12283146 ECH