Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0960 ATGGAGCCTCTGTCTTCTTCTGCAACTGCAACTGCAACCAAACCTCCTTCTCTTCAGTTGGAGGCCGTGGCGCCACCCGCCCCTCTCCGGAAGATCATGGCGGTGGCGACAATCGCAGCCGGCATTCAGTTCGGGTGGGCCCTACAACTCACCCTACTCACACCCTATGTTCAGATTCTCGGAACCCCTCACATGTGGGTCTCATTCATCTGGCTCTGCGGCCCTGTCTCCGGCATCCTCGTCCAGCCAATCGTAGGCTACTCTAGCGACCGCTGCACCTCCCGCTTCGGCCGCCGCCGCCCCTTCATCTTCGCGGGAACTCTCGCAGTCGCCATCGCCGCCTTCCTCATCGGCTTCTCCGCCGACCTTGGCCACCTCCTCGGCGACTCCATCGCTGCCGGAGGAAAAATCCGGCCGCGGACCATCGCCGTGTTCATCCTCGGCTTCTGGATCATCGACTTCGCCAACAACATGCTCCAGGGACCGTGCCGCGCCCTCCTCGCCGACCTCGCAGCCGGTGACAACCGCAAAACAAGGACCGCCTACGCCCTCTACACGTTCTTCATGGCCGCCGGCAACGTCCTAGGCTCGGCCGCCGGGTCCTCCGGCAGGCTCCACCGCGTGCTGCCGTTCACGAAGACGCACGCTTGCGACGATAACTGCGCGAACGTGAAAACGTGCTTTATCTTCTCCGTCACGCTTCTCGTGACGGTTGTGACGGTTACGATGATCTACGTAAAGGAGAGGCAGTTAACGGTGTCGTTAGAAAAGAGCGAAAAAAGCGGGATAGGGGAATTAGTCGGTGCATTGCGGGAGCTTAAGAGGCCGATGCGGATCCTTCTTTTGGTGACGTGTTTCAATTGGATTGCGTGGTTCCCGTTCTTTGAGTACAACACTGATTGGATGGGGACGGAGGTGTACGGTGGAAAGAATAAGGAGCAGAGGATGTACCGTATGGGCGTGCACGCGGGTGCACTGGGGTTGTTGTTGAATTCTGTTGTGTCGGGTGCGGCGTCGTTGGGGATTGGGATGCTGTCGCGTGGGGTTGGCGGGGAGAAGAGGCTTTGGGGGATTGTGAACTTCTTGTTGGCGGTTTGTTTGGCAATGACGGTGGCGGTGAACAAGTTGGCTCAGCATTCGCGGCGGTATGCGGTGGGTCACAGCGGCGCTCAGGAGCCGCTCCCGCCGGCACCTGGCGTTGAGGCTGCTGCCTTGACTCTCTACTCGGTGCTTGGGTTCCCCCTTGCGATGTTGATGTCCGCGGTTAGTGGACCATGGGACAAATTGTTTGGCGGTGGTAACCTTCCATCTTTCCTGGTTGGTGCTGTGGCGGCTGCAATCAGTGGCATATTTTCCATAACCTTGTTACCGTCTCCACCGCCTGATGCTACGGCTGCAACCACCGTTGGAGGAGGCTTTCATTAA 1425 0.5888 MEPLSSSATATATKPPSLQLEAVAPPAPLRKIMAVATIAAGIQFGWALQLTLLTPYVQILGTPHMWVSFIWLCGPVSGILVQPIVGYSSDRCTSRFGRRRPFIFAGTLAVAIAAFLIGFSADLGHLLGDSIAAGGKIRPRTIAVFILGFWIIDFANNMLQGPCRALLADLAAGDNRKTRTAYALYTFFMAAGNVLGSAAGSSGRLHRVLPFTKTHACDDNCANVKTCFIFSVTLLVTVVTVTMIYVKERQLTVSLEKSEKSGIGELVGALRELKRPMRILLLVTCFNWIAWFPFFEYNTDWMGTEVYGGKNKEQRMYRMGVHAGALGLLLNSVVSGAASLGIGMLSRGVGGEKRLWGIVNFLLAVCLAMTVAVNKLAQHSRRYAVGHSGAQEPLPPAPGVEAAALTLYSVLGFPLAMLMSAVSGPWDKLFGGGNLPSFLVGAVAAAISGIFSITLLPSPPPDATAATTVGGGFH* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0960 474 SUPERFAMILY MFS general substrate transporter 32 460 IPR036259 -
Dod06g0960 474 CDD MFS_SLC45_SUC 32 454 - -
Dod06g0960 474 Gene3D MFS general substrate transporter like domains 30 252 IPR036259 -
Dod06g0960 474 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 21 420 - -
Dod06g0960 474 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 417 466 - -
Dod06g0960 474 TIGRFAM GPH_sucrose: sucrose/H+ symporter 28 420 IPR005989 GO:0005887|GO:0008515|GO:0015770
Dod06g0960 474 Pfam MFS/sugar transport protein 41 291 - -
Dod06g0960 474 PANTHER SUGAR TRANSPORTER 21 420 - -
Dod06g0960 474 PANTHER SUGAR TRANSPORTER 417 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0960 Dod-Chr6 12238295 12243112 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0960 2 474 Sucrose Transporter Gene Family AT1G71890 52.510 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0960 K15378 - gmx:547679 602.823