Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0957 ATGGGTGTCACCATGGCCATGGTTCTTGAAAATGGGAACTTGGTTCTCTCAAATGGCAGCAACACTGTTTGGTCAAGCTTTGAGAACCCCACTGATACCATTGTTCCTTCTCAGAACTTCACTTTGGGAATGGCTCTGAGATCTGGGGTGTACTCATTTTCTGTTGAGAAGTCTGGGAACCTTACCCTTAGTTGGCATGAGAGTGGGACTAGTGTGGCTTATTGGGATCAAGGGTTGAACTCTTCCATGAGTGGTGTGAATTTGACTTCACCAGTTTTGGGGTTGAAGAATGTGGGAGTCTTGGAGCTTTCTGATGAGAATTTGACTTCACCTGTTGTTGTTGCATATAGTGGTGACTATAATGAAGGGGGTGGTGATGTGTTGAGGGTGTTGAAGCTTGATGATGATGGGAATTTGAGGATTTATAGCTCTAAGAAGGGTAGTGGGGTTGAGACTGTGATGTGGGTTGCTGTTGAGGATCAATGTGAGGTTTTTGGTTACTGTGGGAACTATGGTGTTTGTAGTTACAATGTTTCCAATGATTACAAACCGGTTTGCGGGTGTCCATCTCAGGATTTTGAGTTGGTTGATGCTACTGATGGTAGGAAAGGGTGTAGGAGGAAGGAGAGGCTTGAGGATTGTGTAGGGAAGGTGGCTATGTTGCAAGTGGACCATGCAAAATTCTTGACATATCCCCCCATATTTGTGATTAATCCTGAGGTGTTTTTCATTGGTATATCAGCTTGCAGTGGGAATTGTCTTGCAGCTAATTCTTGCTTTGCTTCCACTTCCTTGGCAGATGGAACTGGATGGTGTTACATAAAGACATCAAATTTTATTAGCGGATACCAGAATCCTGCTCTACCTAGCACTTCCTTTATTAAGGTCTGTGCACCAGGGGCTCCAAACTCACCACCTTCTTCGGAGAGTGACATTGTGAAGAAGCATTGGAGGATACAATCTTGGATAGTGGCTGTAGCTGTTTTGAGTGCCCTTTTAGGATTCCTTGCCTGTGAGGGTGGTTTGTGGTTGTGGTGTTGTAGGAACAGCGCAAGATTTGGAGGGTTCTCTGCTCAGTATGCTCTTCTTGAGTATGCTTCTGGGGCACCAATCCACTTCTCTTACAAGGAGCTACAAAGGTCAACCAAGGGGTTCAAGGAGAAGCTTGGTGATGGAGGATTTGGTGCTGTTTATAGAGGAATTCTTGCTAATAGTACTGTTGTTGCAGTGAAACAACTTGAGGGCATTGAGCAAGGTGATAAACAGTTTAGGATGGAGGTTTCTGCCATCAGTAGCACCCATCATCTGAACTTAGTGAGGCTGATTGGTTTCTGTTCGGAAGGGCGTCACCGGCTCTTGGTATATGAGTTCATGAAAAACGGATCACTTGATAATTTTCTTTTTGTTGGTGAAGAAAAGTCAGGGAAATTGCTTGATTGGGAGTATAGATTCAACATTGCTCTAGGTGCTGCTAGGGGCATGACATACCTTCATGAGGAGTGCAGAAACTGCATCGTCCATTGTGACATAAAACCTGAAAACATTCTCTTAGATGAGAGTTACAATGCAAAAGTCTCAGATTTTGGCCTTGCAAAGCTCTCAAGTCCCGTGGATCGTAGAAACAGGACCTTGACAAGTGTGAGGGGAACAAGAGGGTATTTAGCACCTGAATGGCTTGCAAATCTTCCCATTACTTCCAAATCTGATGTCTACAGTTATGGTATGGTTTTGTTGGAGATAGTGAGTGGGAGAAGGAACTTTGAAGTCTCGGAAGAGACAAACCGAAGGAAGTGTTCTATATGGGCATATGAGGAGTTTGAGAAAGGTAACATAAAGGGTGTGATTGACAAAAGATTGGTTGGCCAAGAAGTCAATTTGGAGGAAGCAAAAAGAGTGCTTTTGGTATGTTTTTGGTGCATACAGGAGCAGCCATCTATGAGGCCAACAATGAGCAAGGTTGTGCAAATGCTAGAAGGTGTAACAGATATTGAGAAGCCACCATCTCCAAAATCTATCACATTAGGATCCTCTAGTGTAATCAGTGGCAATGCCACCACTGCCATCTCCACTTTTGCAGTCTCATCAGCTCCCCCGGCATGCTCTCAATCTTCGTCTTTGTTGACTAATTGA 2130 0.4413 MGVTMAMVLENGNLVLSNGSNTVWSSFENPTDTIVPSQNFTLGMALRSGVYSFSVEKSGNLTLSWHESGTSVAYWDQGLNSSMSGVNLTSPVLGLKNVGVLELSDENLTSPVVVAYSGDYNEGGGDVLRVLKLDDDGNLRIYSSKKGSGVETVMWVAVEDQCEVFGYCGNYGVCSYNVSNDYKPVCGCPSQDFELVDATDGRKGCRRKERLEDCVGKVAMLQVDHAKFLTYPPIFVINPEVFFIGISACSGNCLAANSCFASTSLADGTGWCYIKTSNFISGYQNPALPSTSFIKVCAPGAPNSPPSSESDIVKKHWRIQSWIVAVAVLSALLGFLACEGGLWLWCCRNSARFGGFSAQYALLEYASGAPIHFSYKELQRSTKGFKEKLGDGGFGAVYRGILANSTVVAVKQLEGIEQGDKQFRMEVSAISSTHHLNLVRLIGFCSEGRHRLLVYEFMKNGSLDNFLFVGEEKSGKLLDWEYRFNIALGAARGMTYLHEECRNCIVHCDIKPENILLDESYNAKVSDFGLAKLSSPVDRRNRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSEETNRRKCSIWAYEEFEKGNIKGVIDKRLVGQEVNLEEAKRVLLVCFWCIQEQPSMRPTMSKVVQMLEGVTDIEKPPSPKSITLGSSSVISGNATTAISTFAVSSAPPACSQSSSLLTN* 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0957 709 ProSiteProfiles Bulb-type lectin domain profile. 31 154 IPR001480 -
Dod06g0957 709 SMART serkin_6 383 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0957 709 PANTHER G-TYPE LECTIN S-RECEPTOR SERINE/THREONINE-PROTEIN KINASE 2 705 - -
Dod06g0957 709 Pfam Protein kinase domain 386 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0957 709 SUPERFAMILY alpha-D-mannose-specific plant lectins 3 78 IPR036426 -
Dod06g0957 709 CDD STKc_IRAK 389 659 - -
Dod06g0957 709 Gene3D Transferase(Phosphotransferase) domain 1 458 670 - -
Dod06g0957 709 Pfam S-locus glycoprotein domain 126 188 IPR000858 GO:0048544
Dod06g0957 709 ProSitePatterns Serine/Threonine protein kinases active-site signature. 505 517 IPR008271 GO:0004672|GO:0006468
Dod06g0957 709 ProSitePatterns Protein kinases ATP-binding region signature. 389 411 IPR017441 GO:0005524
Dod06g0957 709 ProSiteProfiles Protein kinase domain profile. 383 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0957 709 SUPERFAMILY Protein kinase-like (PK-like) 366 658 IPR011009 -
Dod06g0957 709 PIRSF SRK 2 704 IPR024171 GO:0004674
Dod06g0957 709 PANTHER OS07G0415500 PROTEIN 2 705 - -
Dod06g0957 709 Gene3D Phosphorylase Kinase; domain 1 357 457 - -
Dod06g0957 709 Gene3D - 27 157 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0957 Dod-Chr6 12186876 12189909 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0957 359 667 Receptor kinase-like Gene Family AT5G20050 42.236 3.74e-80 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Dod06g0957 Pkinase 4.8e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0957 - - gmx:100810753 1083.55