Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0952 ATGGAGAGAAAGTTCTGGGCTTTGGGTTTCATCTGGTGGTTCTTGTTGGTTCATCCACTATGGCTTATTTCTGCTAACATGGAAGGTGATGCTTTACATAGCCTGAGGACAAATTTGCAGGATCCTAACAATGTTTTGCAAAGTTGGGATCCAACACTTGTCAATCCTTGCACTTGGTTTCACGTAACATGCAACAATGATAATAGTGTCATAAGAGTTGATCTGGGGAATGCTGCTTTGTCTGGTCAACTTGTTCCGCAGCTCGGTCAGCTCAAGAATTTACAGTACTTGGAACTTTACAGCAATAACATTACTGGCCCTATTCCAAGTGACCTGGGGAATCTTACTAACTTGGTGAGCTTGGATTTGTACCTAAATAGTTTCACCGGCCCTATCCCAGATTCATTGGGCAAGTTGTCAAAATTGCGATTCCTCCGGCTTAACAACAACAGCTTGACGGGTCCTATTCCCATGGCACTGACTAATATTTCATCTCTTCAAGTTTTGGATTTGTCAAATAACGATCTATCAGGTGTGGTTCCTGATAATGGCTCCTTTTCATTATTCACTCCTATCAGTTTTGCCAACAACTTGGATCTATGTGGACCGGTCACTGGACACCCTTGTCCAGGCTCTCCTCCATTTTCTCCTCCTCCCCCTTTTGTGCCTCCACCCCCAGTTTCTGCTGCCAGTGCCACTGGGGCAATAGCTGGAGGAGTTGCTGCAGGTGCTGCTCTATTGTTTGCTGCACCTGCAATTGCATTTGCATGGTGGCGTCGAAGGAAACCACAAGAATTTTTCTTTGATGTCCCTGCTGAAGAGGATCCCGAAGTCCATCTTGGGCAGCTTAAGAGGTTCTCACTACGAGAACTGCAAGTTGCAACAGATAGTTTCAGCAATAAGAACATTCTTGGGAGGGGAGGATTTGGTAAGGTGTACAAAGGACGCTTGGCAGATGGTTCATTGGTTGCTGTGAAAAGATTGAAAGAGGAGCGCACGCCCGGTGGGGAGCTTCAGTTTCAGACTGAAGTAGAAATGATCAGCATGGCTGTGCATAGAAATCTCCTCCGTTTACGTGGGTTCTGTATGACTCCAACGGAAAGGCTGCTTGTTTATCCTTACATGGCCAATGGAAGTGTTGCCTCATGCTTAAGAGAGCGTCCCTCACATCAAGAACCACTAGATTGGCCAACAAGGAAAAGAATAGCTTTGGGGTCGGCAAGGGGTCTATCATATTTGCATGATCATTGTGACCCAAAGATTATTCATCGTGATGTGAAAGCCGCAAACATATTGTTGGATGAGGAGTTTGAGGCTGTTGTTGGGGACTTTGGATTGGCAAAACTCATGGATTACAAAGACACGCATGTGACAACTGCTGTACGGGGTACAATCGGGCACATAGCTCCGGAGTACCTGTCCACCGGTAAATCTTCAGAGAAAACCGATGTGTTTGGTTATGGCATCATGCTTCTGGAGCTTATCACTGGGCAAAGAGCTTTTGACCTTGCTCGCCTTGCAAATGATGATGATGTCATGCTTCTTGATTGGGTAAAAGGGCTTCTGAAAGAGAAAAAGCTGGAAATGCTGGTTGATCCTGATCTACAGACCAACTACAAAGAAGCCGAGGTAGAACAATTGATCCAGGTTGCACTGCTTTGCACACAAGGTTCGCCTATGGACCGGCCAAAGATGTCAGATGTGGTGAGAATGCTCGAAGGTGATGGTTTGGCAGAACGATGGGATGAATGGCAGAAAGTGGAAGTTCTCCGGCAGGAAGTGGAGCTGGCCCCCCATCCCAATTCTGATTGGATTGTCGACTCCACTGAAAATCTACGTGCAGTTGAGTTATCTGGTCCAAGATGCAGTAAAGAAAGCTTAGGAAACCACAAGAAATGCCATTACTTCATAGCTACTCGGTGA 1923 0.4607 MERKFWALGFIWWFLLVHPLWLISANMEGDALHSLRTNLQDPNNVLQSWDPTLVNPCTWFHVTCNNDNSVIRVDLGNAALSGQLVPQLGQLKNLQYLELYSNNITGPIPSDLGNLTNLVSLDLYLNSFTGPIPDSLGKLSKLRFLRLNNNSLTGPIPMALTNISSLQVLDLSNNDLSGVVPDNGSFSLFTPISFANNLDLCGPVTGHPCPGSPPFSPPPPFVPPPPVSAASATGAIAGGVAAGAALLFAAPAIAFAWWRRRKPQEFFFDVPAEEDPEVHLGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPSHQEPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQTNYKEAEVEQLIQVALLCTQGSPMDRPKMSDVVRMLEGDGLAERWDEWQKVEVLRQEVELAPHPNSDWIVDSTENLRAVELSGPRCSKESLGNHKKCHYFIATR* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0952 640 Gene3D Ribonuclease Inhibitor 24 211 IPR032675 -
Dod06g0952 640 Pfam Leucine rich repeat N-terminal domain 25 65 IPR013210 -
Dod06g0952 640 ProSiteProfiles Protein kinase domain profile. 298 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0952 640 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 14 621 - -
Dod06g0952 640 PANTHER LEUCINE-RICH REPEAT DOMAIN, L DOMAIN-LIKE PROTEIN-RELATED 14 621 IPR031048 GO:0004675|GO:0005102|GO:0006468
Dod06g0952 640 Gene3D Transferase(Phosphotransferase) domain 1 375 592 - -
Dod06g0952 640 ProSitePatterns Serine/Threonine protein kinases active-site signature. 421 433 IPR008271 GO:0004672|GO:0006468
Dod06g0952 640 Pfam Protein kinase domain 299 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0952 640 CDD STK_BAK1_like 304 575 - -
Dod06g0952 640 SMART serkin_6 298 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0952 640 Pfam Leucine Rich Repeat 165 182 IPR001611 GO:0005515
Dod06g0952 640 SUPERFAMILY L domain-like 29 190 - -
Dod06g0952 640 Gene3D Phosphorylase Kinase; domain 1 267 374 - -
Dod06g0952 640 ProSitePatterns Protein kinases ATP-binding region signature. 304 326 IPR017441 GO:0005524
Dod06g0952 640 SUPERFAMILY Protein kinase-like (PK-like) 277 573 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0952 Dod-Chr6 12085121 12095609 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0952 18 621 Receptor kinase-like Gene Family AT1G71830 87.974 0.0 1043
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Dod06g0952 Pkinase 2.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0952 K13418 - gmx:100789884 1116.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0952 06 12085121 12095609 Dod06g0952 06 12085121 12095609 ECH
Dod02g2842 02 60652160 60661986 Dod06g0952 06 12085121 12095609 PCT