Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0943 ATGGGTGCGGTTTCGGAATCCGGTTCAGTTGAGTGTTTCAGCAACGCTATGGCGTCGATGCCGGGATTTCGGTTCCATCCCACGGACGAGGAGCTGGTGATGTACTATCTGAAGAGGAAGATATGTGGGAAGAAGCTGAAGCTCGACGTGATTCGAGAAACCGATGTGTACAAGCGTGAACCTGAGGAATTACCAGGGCTATCTGTACTGAAAACTGGAGATAGGCAATGGTTCTTTTTCTGTCATAGAGATAGGAAGTATCCTAACGGTGGAAGGTCTAACCGAGGAACAAAAAGTGGGTACTGGAAAGCAACTGGAAAGGATCGTAATATAACATATAATTCTCGGGGAGTTGGAGTGAAAAAGACACTGGTTTTCTACAGAGGCAGAGCTCCTAATGGTGCGCGGACTGATTGGGTTATGCATGAATACACCTTGGATGAAGAAGAGCTTAGGAGATGCCAGAGTATTAAGGACTATTTTGCACTTTACAAGCTTTACAAGAAAAGTGGACCTGGTCCTAAAAATGGGGAACAGTATGGAGCTCCATTTAAAGAGGAACAGTGGGCTGATGATGATGGTGTAGATTTTAATATCAACTCAGCTGATCGGGAGGTAACAAATACTGTCCCTGTTAATGATCAACTGCAGCCTTTGCTTGATGATGAAATTGAAGACTTGATCCATGGAATTTTGGATAATGATCTTACCCTTGATCAGCTGTATGGGAATGGTCATCCTGAATTACCTCAGGTTGTCGCTGAAGAAACGCAAAGTACTGTGGTGGATCAAGTCTCTGAGGCAGTGGTGTTCCCTGAGCCAGACAGAACTCTTCAGTCAAGCAATCAGCATTATGACGTGAAGTCTGATGTTGACTTCAATCAGTCAGTTACCTCTCACTTTCATGTTTCGGAAGCATCTGAGGCCCATTCCAGTCCCAACATTCGGATAGAGGACTATCTTTTTCAGGAGGATGACTTCTTGGAAATTAATGATCTCAATGGTACTGAGCCCACGTTGTCAAATACAGGAACGCCTGTGGGGAACCTGGTGAACCTGCAGCCTGAAGATGGGTTGAGTGAACTTGATTTGTTCCTAGATGCAGAGATGTTTTTTCATGACTTGGGACCAATCTATCAAGAAACCATTTCTCATGGATATATGGATAATGCTTTTGACAGCAACATCGAAAATCAAAGTTATCACTTGTTGCCCAATCCAGAGGATGCTAATCAAAATGTTGACGAATTCTGTATGCGTGATGAAAGAAACGCCGTGAGTCTTGCTGAAGGCTTTTCTGGTTCTTTCTCCCTACCAAACACAGGTGCTGTACATGATTCTGCCAGCTTTCCTACAGAAGGCTATGAAAATCAAAGTAGCACTGTGGAAGATGCTCCTAGAAGTGGATTCTCCTCTGCTCTCTGGGCCTTTGTTGAGTCAATACCTACCACTCCTGCATCAGCTGCTGAAAACCCTTTAGTAAACCGGGCTTTGAACCGAATGTCTAGTATCAGCCGAGTGAAGATTAACATCAAGCCTACAAACGCTGCGGCAGGTAAAGACTCTGCAACTATGAAGAGAGCAGGCAGAAAGGGGTTTTCATTCCTTTTATTCCCTATTCTTATTGCTTTATGTGCTTTCTTGTGGGTTTCTATTGGAACAATAAGATCATTAGGGAGGTGCATCTCTCCTTGA 1695 0.4407 MGAVSESGSVECFSNAMASMPGFRFHPTDEELVMYYLKRKICGKKLKLDVIRETDVYKREPEELPGLSVLKTGDRQWFFFCHRDRKYPNGGRSNRGTKSGYWKATGKDRNITYNSRGVGVKKTLVFYRGRAPNGARTDWVMHEYTLDEEELRRCQSIKDYFALYKLYKKSGPGPKNGEQYGAPFKEEQWADDDGVDFNINSADREVTNTVPVNDQLQPLLDDEIEDLIHGILDNDLTLDQLYGNGHPELPQVVAEETQSTVVDQVSEAVVFPEPDRTLQSSNQHYDVKSDVDFNQSVTSHFHVSEASEAHSSPNIRIEDYLFQEDDFLEINDLNGTEPTLSNTGTPVGNLVNLQPEDGLSELDLFLDAEMFFHDLGPIYQETISHGYMDNAFDSNIENQSYHLLPNPEDANQNVDEFCMRDERNAVSLAEGFSGSFSLPNTGAVHDSASFPTEGYENQSSTVEDAPRSGFSSALWAFVESIPTTPASAAENPLVNRALNRMSSISRVKINIKPTNAAAGKDSATMKRAGRKGFSFLLFPILIALCAFLWVSIGTIRSLGRCISP* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0943 564 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 14 563 - -
Dod06g0943 564 SUPERFAMILY NAC domain 16 169 IPR036093 GO:0003677|GO:0006355
Dod06g0943 564 Pfam No apical meristem (NAM) protein 21 146 IPR003441 GO:0003677|GO:0006355
Dod06g0943 564 PANTHER NAC TRANSCRIPTION FACTORS 2 14 563 - -
Dod06g0943 564 ProSiteProfiles NAC domain profile. 19 169 IPR003441 GO:0003677|GO:0006355
Dod06g0943 564 Gene3D NAC domain 28 171 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0943 Dod-Chr6 11906050 11910170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0943 4 562 NAC Transcription Factor Family AT1G34190 42.333 1.86e-137 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod06g0943 NAM 1.7e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0943 - - gmx:100794925 810.061