Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0929 ATGACAAAGATAGAAGTGAGTACTTGTCTCTCACCTGATGGACAAGCCCTTCTTTCCCTTATATCTGCAGCCGGCCCTGCTGCAATATCATCACCTTCAGTTCTCTCCTCATGGAACCCTTCAAGCTCAACACCATGTTCATGGAAGGGAATCACTTGCTCCCCACAAGGTAGAGTCATCTCCCTCTCTGTCCCGGACACTTTTCTCAACCTTTCCTATCTGCCTCCTCAGCTCTCCTCTTTGTCAATGCTGCAGCTTCTCAACCTCTCTTCCACCAATGTCTCTGGCCCTATACCACCCTCTTTTGGTCAACTCTCACACCTTCAACTCCTTGACCTCTCATCAAACTCTCTCACTGGTTCCATTCCTTCTGAACTTGGAATGCTCTCTTCCCTTCAATTCCTTTTCTTGAACTCCAACAGATTGACTGGAACCATTCCTCGGCATCTTGCCAATCTGACTTCCCTTGAAGTTCTGTGCCTCCAAGACAATCTCCTTAATGGTTCAATCCCATCGCAGTTAGGCTCTTTGACGTCACTGCAGCAGTTTAGGATAGGGGGAAATCCATACCTCACTGGAGAGATTCCATCACAGTTAGGCCTACTCACAAACCTCACCATATTTGGTGCAGCTGCTACTGGACTTTCTGGTGTCATTCCCTCCACATTTGGTAACTTGATCAACCTCCAAACTTTAGCTCTCTATGACACTGAAATTTCTGGTCCAATACCACCAGAACTTGGGTTGTGTTCTGAGCTGAGAAATCTTTATTTGTACATGAATAAGCTCACTGGCTCTATTCCTCCTCATTTGAGTAAGCTGCAAAAGCTCACTAGCTTGCTTCTTTGGGGAAATGCTTTATCTGGGCCAATCCCATCTGAGACTTCCAACTGTTCATCACTTGTTGTATTTGATGCCTCTTCCAATGACCTCTCGGGTGAAATACCTGAAGACTTTGGGAAGCTAGTAGTTCTGGAACAGCTTCATCTATCAGACAATTCACTCACAGGTAAGATACCATGGCAGTTGAGCAACTGCACAAGCCTTGCCACTGTTCAGTTTGACAAGAATCAGTTATCAGGTATAATTCCATGGCAGGTTGGGAAGTTGAAGTTCTTGCAGAGTTTTTACTTGTGGGGTAACTCAGTGTCTGGAACCATACCACCTTCTTTTGGAAACTGCACAGAACTAAATGCACTTGACCTTTCAAGGAACAAGCTGACAGGTTCTATCCCAGAAGAAATTTTCAGTTTGAAGAGATTGAGTAAGCTCCTGCTTCTGGGAAATTCATTGACGGGAGGGTTGCCACCAAGTGTTGCAGATTGCCAATCTTTGGTTAGGCTGAGGGTTGGAGAAAACCAGCTTTCAGGAAATATTCCTAAGGAGATAGGCCAATTGCAGAATCTGGTGTTTCTTGACTTGTACATGAACAATTTCTCTGGAAGCTTACCAGTGGAGATTGCCAACATCACAGTTCTTGAGCTTTTAGATGTGCATAACAACCACCTAACCGGGGAAATTCCATCTCAGATTGGGGAACTTGCAAACTTGGAGCAGCTTGATCTCAGCCAAAACAGGTTGACAGGTGAAATTCCTTGGAGTTTTGGAAACTTCAGTTATTTGAACAAGCTCATCCTCAACAATAATTTACTCACAGGATCAATCCCAAAGTCTATAAGAAACTTGCAGAAGCTAACTCTACTAGATTTGAGTTACAACCACCTCTCTGGTGGAATACCCCCTGAGATTGGTTATGTTACAAGCTTAACCATCAGTTTGGACTTAAGTTCTAACGCATTTACAGGAGAAATCCCAGATTCAATGTCTGCTTTGACACATTTACAATCACTTGATCTCTCTCATAATATGTTTTATGGAGGAATTAAAGTTCTGGGGTCTCTCACTAGTCTCACTTCCCTGAATATCTCCTACAACAATTTCTCAGGTCCTATCCCAGTAACTCCATTCTTCAGAACTCTTTCTTTCAATTCATGTCTTCAGAACCCCCTTCTATGTCAGTCCATTGATGGGAATACATGTTCTTCAAGCCTGATCCAAAAAAATGGCTTAAAATCTGCTAAAACCATAGCATTGATCACGGTGATTCTCACTTCAGTTACCATAATTATCATTGCATCCTGTATTCTAGTGACTCGCAGTAACAGGTATCAAGTTGAAAAAACTTTGGGGGCTTTGGCTTCCACATCAGGAGCTGAGGATTTTTCGTATCCTTGGACCTTCATCCCATTTCAAAAGCTGAACTTCAGCATAGATAACATCTTGGATTGTTTGAAGGCTGAGAATGTGATTGGAAAAGGTTGTTCTGGTGTTGTGTACAAGGCTGAGATGCCTAATGGGGAGTTGATAGCAGTGAAGAAGCTTTGGAAAGCAAACAAAGAAGATGAAACAGTGGATTCTTTTGCTGCAGAGATTCAGATTCTTGGATACATCCGGCACAGGAACATTGTGAGGCTCCTAGGTTATTGTTCCAACAGGAGTGTCAAGCTTCTTCTCTACAACTACATCCCAAATGGTAACCTAAGACAGCTTTTGCAAAGGAACAGGAACTTAGACTGGGAAACTAGATACAAGATTGCTGTTGGGTCAGCTCAAGGTCTAGCTTACCTTCATCATGATTGTGTCCCTCCAATTCTTCACAGAGATGTTAAGTGCAACAACATACTTCTAGATTCCAAATATGAAGCATATCTGGCAGATTTTGGTCTTGCAAAGCAAATGAATTCACCGAGTTATCACCAGGCAATGTCTAGAGTTGCTGGTTCTTATGGCTATATTGCCCCAGGCAAGTTTGCTTGA 2817 0.4299 MTKIEVSTCLSPDGQALLSLISAAGPAAISSPSVLSSWNPSSSTPCSWKGITCSPQGRVISLSVPDTFLNLSYLPPQLSSLSMLQLLNLSSTNVSGPIPPSFGQLSHLQLLDLSSNSLTGSIPSELGMLSSLQFLFLNSNRLTGTIPRHLANLTSLEVLCLQDNLLNGSIPSQLGSLTSLQQFRIGGNPYLTGEIPSQLGLLTNLTIFGAAATGLSGVIPSTFGNLINLQTLALYDTEISGPIPPELGLCSELRNLYLYMNKLTGSIPPHLSKLQKLTSLLLWGNALSGPIPSETSNCSSLVVFDASSNDLSGEIPEDFGKLVVLEQLHLSDNSLTGKIPWQLSNCTSLATVQFDKNQLSGIIPWQVGKLKFLQSFYLWGNSVSGTIPPSFGNCTELNALDLSRNKLTGSIPEEIFSLKRLSKLLLLGNSLTGGLPPSVADCQSLVRLRVGENQLSGNIPKEIGQLQNLVFLDLYMNNFSGSLPVEIANITVLELLDVHNNHLTGEIPSQIGELANLEQLDLSQNRLTGEIPWSFGNFSYLNKLILNNNLLTGSIPKSIRNLQKLTLLDLSYNHLSGGIPPEIGYVTSLTISLDLSSNAFTGEIPDSMSALTHLQSLDLSHNMFYGGIKVLGSLTSLTSLNISYNNFSGPIPVTPFFRTLSFNSCLQNPLLCQSIDGNTCSSSLIQKNGLKSAKTIALITVILTSVTIIIIASCILVTRSNRYQVEKTLGALASTSGAEDFSYPWTFIPFQKLNFSIDNILDCLKAENVIGKGCSGVVYKAEMPNGELIAVKKLWKANKEDETVDSFAAEIQILGYIRHRNIVRLLGYCSNRSVKLLLYNYIPNGNLRQLLQRNRNLDWETRYKIAVGSAQGLAYLHHDCVPPILHRDVKCNNILLDSKYEAYLADFGLAKQMNSPSYHQAMSRVAGSYGYIAPGKFA* 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0929 938 Pfam Leucine Rich Repeat 325 346 IPR001611 GO:0005515
Dod06g0929 938 PANTHER - 2 934 - -
Dod06g0929 938 Gene3D Ribonuclease Inhibitor 433 682 IPR032675 -
Dod06g0929 938 Gene3D Ribonuclease Inhibitor 365 432 IPR032675 -
Dod06g0929 938 Pfam Leucine rich repeat 84 142 IPR001611 GO:0005515
Dod06g0929 938 Pfam Leucine rich repeat 516 575 IPR001611 GO:0005515
Dod06g0929 938 Pfam Leucine rich repeat 373 431 IPR001611 GO:0005515
Dod06g0929 938 SMART serkin_6 764 937 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0929 938 SUPERFAMILY Protein kinase-like (PK-like) 748 934 IPR011009 -
Dod06g0929 938 PRINTS Leucine-rich repeat signature 108 121 - -
Dod06g0929 938 PRINTS Leucine-rich repeat signature 514 527 - -
Dod06g0929 938 ProSitePatterns Protein kinases ATP-binding region signature. 770 793 IPR017441 GO:0005524
Dod06g0929 938 ProSitePatterns Serine/Threonine protein kinases active-site signature. 884 896 IPR008271 GO:0004672|GO:0006468
Dod06g0929 938 Pfam Protein kinase domain 767 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0929 938 ProSiteProfiles Protein kinase domain profile. 764 938 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0929 938 Gene3D Transferase(Phosphotransferase) domain 1 842 936 - -
Dod06g0929 938 Gene3D Ribonuclease Inhibitor 12 169 IPR032675 -
Dod06g0929 938 Gene3D Phosphorylase Kinase; domain 1 741 841 - -
Dod06g0929 938 SMART LRR_typ_2 562 586 IPR003591 -
Dod06g0929 938 SMART LRR_typ_2 129 152 IPR003591 -
Dod06g0929 938 SMART LRR_typ_2 153 177 IPR003591 -
Dod06g0929 938 SMART LRR_typ_2 322 346 IPR003591 -
Dod06g0929 938 SMART LRR_typ_2 105 128 IPR003591 -
Dod06g0929 938 SMART LRR_typ_2 611 638 IPR003591 -
Dod06g0929 938 SMART LRR_typ_2 514 537 IPR003591 -
Dod06g0929 938 SMART LRR_typ_2 394 418 IPR003591 -
Dod06g0929 938 SMART LRR_typ_2 274 298 IPR003591 -
Dod06g0929 938 Gene3D Ribonuclease Inhibitor 266 364 IPR032675 -
Dod06g0929 938 Gene3D Ribonuclease Inhibitor 170 265 IPR032675 -
Dod06g0929 938 Pfam Leucine rich repeat N-terminal domain 11 54 IPR013210 -
Dod06g0929 938 PANTHER UNNAMED PRODUCT 2 934 - -
Dod06g0929 938 SUPERFAMILY L domain-like 27 384 - -
Dod06g0929 938 SUPERFAMILY L domain-like 363 684 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0929 Dod-Chr6 11802734 11805550 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0929 9 934 Receptor kinase-like Gene Family AT5G56040 45.571 0.0 748
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dod06g0929 Pkinase 5.9e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0929 - - ccaj:109812175 1518.83