Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0925 ATGGCAGAATCGGAGACGGGGACGCCAACGGCGGCGTCGGTGCCGGCGACGCCGGATACTCCAGGAGGGCCGCTGTTCACGGCGCTGCGAGTCGACTCACTGTCGCACGAGCCGTCGTTTGCAATGGCAAGGTGCAAGTGCTTGCCAGCTAAAGCTCATACTTGCTTCACCGATTTCTCTGTTGGGCTTCCAATTCCAAATGTGTCTCTCACTCAAAAGGTTGCAGCAGAGTTTGTGGGGACATTCATATTGATATTTGCAGCAGCCGCAGGACCTATAGTGAACAACAAGTACAACGGTGCAGAGGGCCTGATGGGGAATGCAGCATGTGCTGGACTAACAGTGATGTTCATCATTCTCTCCATTGGCCACATCTCTGGTGCACACCTCAATCCATCTCTCACCATTGCCTTTGCAGCATTCCGCCACTTCCCATGGACTCATGTCCCAGCATACATAGCAGCACAGGTCTCTGCTTCCATCTGTGCCTGTTTTGCTCTCAAGGGTGTTTACCATCCTTACCTCACTGGTGGAGTCACTGTCCCTTCTGTCACTGTTCGCCAAGCCTTTGCAACTGAGTTCATAATCACTTTCATTCTCATGTTTGTGGTCACTGCTGTTGCTACTGATACTCGTGCGGTTGGAGAATTGGCTGGTATTGCTGTTGGGGCTACAGTTTTGCTCAACATTCTCATATCAGGGCCAACAAGTGGTGGTTCCATGAATCCGGTGCGCACCTTGGGTCCAGCCGTTGCAGCAGGCAATTACAAGCATATCTGGCTATATTTGGTGGCGCCAACGCTCGGTGCTCTCGCCGGTGCAGGCGTTTATACACTCATCAAGCTCCGCGACAGTGACGCCGGGCCGCCGCGAGAGGTTCGGAGCTTCCGCGACAGGTCAGGCTAG 906 0.5375 MAESETGTPTAASVPATPDTPGGPLFTALRVDSLSHEPSFAMARCKCLPAKAHTCFTDFSVGLPIPNVSLTQKVAAEFVGTFILIFAAAAGPIVNNKYNGAEGLMGNAACAGLTVMFIILSIGHISGAHLNPSLTIAFAAFRHFPWTHVPAYIAAQVSASICACFALKGVYHPYLTGGVTVPSVTVRQAFATEFIITFILMFVVTAVATDTRAVGELAGIAVGATVLLNILISGPTSGGSMNPVRTLGPAVAAGNYKHIWLYLVAPTLGALAGAGVYTLIKLRDSDAGPPREVRSFRDRSG* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0925 301 PANTHER AQUAPORIN NIP2-1 10 295 IPR034294 -
Dod06g0925 301 ProSitePatterns MIP family signature. 129 137 IPR022357 -
Dod06g0925 301 MobiDBLite consensus disorder prediction 1 15 - -
Dod06g0925 301 Gene3D Glycerol uptake facilitator protein. 66 289 IPR023271 -
Dod06g0925 301 PRINTS Major intrinsic protein family signature 111 135 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod06g0925 301 PRINTS Major intrinsic protein family signature 223 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod06g0925 301 PRINTS Major intrinsic protein family signature 72 91 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod06g0925 301 PRINTS Major intrinsic protein family signature 148 167 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod06g0925 301 PRINTS Major intrinsic protein family signature 192 210 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod06g0925 301 PRINTS Major intrinsic protein family signature 260 280 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod06g0925 301 PANTHER AQUAPORIN NIP5-1-RELATED 10 295 - -
Dod06g0925 301 Pfam Major intrinsic protein 68 277 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod06g0925 301 SUPERFAMILY Aquaporin-like 69 284 IPR023271 -
Dod06g0925 301 CDD MIP 72 280 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod06g0925 301 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0925 Dod-Chr6 11739213 11745504 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0925 25 297 Major Intrinsic Protein MIP AT4G10380 73.835 2.19e-146 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0925 K09874 - gmx:100804356 542.347