Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0923 ATGAACTCCAAAGGTCCCCACACTGATTCACTTGATGCATTGAAGTTTAATACGTCTGCTCAAAAGGATCCAGATAGGTTCTTCATGTCCATCAGGGAAGGAGAGAAAAAGCCGTTTGATGTTTTACGTGTTTTGTATGATGGTTGCATTGCCGGAGGTGTCGCTGGTGTCGTTGTAGAGACAGCTCTGTATCCCATTGATACCATCAAAACGCGATTACAGGTCGCTCGTGCTGGAGGGCAAATTATTTTGAAGGGTCTGTATTCAGGATTGGCTGGAAACTTAGCTGGTGTCTTACCAGCTTCTGCAATTTTCGTTGGTGTGTATGAACCCACAAAGCAGAAATTGCTAAGGTCCTTCCCTGAGAATCTCAGCGCTGCAGCTCATTTTGCTGCAGGTGCCATTGCAGGTGCTGCTTCTTCTCTTGTTCGTGTTCCAACTGAGGTTGTTAAGCAAAGGATGCAAACTGGGCAATTTAGATCTGCTCCGGATGCTGTCCGTCTTATCATTGCTAATGAGGGTTTTAAAGGTCTTTATGCGGGATACGGATCTTTCTTATTGCGAGATTTACCATTTGATGCCATACAATTCTGTATCTACGAGCAGCTACGGATTGGTTATAAACTAGCAGCAAAAAGAGATCTGAATGATCCAGAGAATGCTATGCTTGGGGCATTTGCTGGTGCCATAACTGGAGCAGTTACAACTCCTCTTGATGTAGTAAAAACTAGATTGATGGTTCAGGGATCACAAAACCATTACAAAGGCATTTATGATTGTGTGAGGACAATAGTCAAAGAGGAAGGAACTAATGCTCTTTTTAAGGGTATTGGCCCAAGAGTTTTGTGGATAGGAATAGGAGGTTCAATATTTTTCGGTGTTCTTGAGAGGACAAAGCAGATTCTTGCTCAGAGGCATCCAAAAACTTAG 930 0.4323 MNSKGPHTDSLDALKFNTSAQKDPDRFFMSIREGEKKPFDVLRVLYDGCIAGGVAGVVVETALYPIDTIKTRLQVARAGGQIILKGLYSGLAGNLAGVLPASAIFVGVYEPTKQKLLRSFPENLSAAAHFAAGAIAGAASSLVRVPTEVVKQRMQTGQFRSAPDAVRLIIANEGFKGLYAGYGSFLLRDLPFDAIQFCIYEQLRIGYKLAAKRDLNDPENAMLGAFAGAITGAVTTPLDVVKTRLMVQGSQNHYKGIYDCVRTIVKEEGTNALFKGIGPRVLWIGIGGSIFFGVLERTKQILAQRHPKT* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0923 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 219 301 IPR018108 -
Dod06g0923 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 42 115 IPR018108 -
Dod06g0923 309 PANTHER S-ADENOSYLMETHIONINE CARRIER 1, CHLOROPLASTIC/MITOCHONDRIAL 12 308 - -
Dod06g0923 309 Gene3D Mitochondrial carrier domain 47 309 IPR023395 -
Dod06g0923 309 SUPERFAMILY Mitochondrial carrier 49 296 IPR023395 -
Dod06g0923 309 Pfam Mitochondrial carrier protein 219 304 IPR018108 -
Dod06g0923 309 Pfam Mitochondrial carrier protein 48 118 IPR018108 -
Dod06g0923 309 Pfam Mitochondrial carrier protein 124 204 IPR018108 -
Dod06g0923 309 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 12 308 - -
Dod06g0923 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 124 206 IPR018108 -
Dod06g0923 309 PRINTS Mitochondrial carrier protein signature 61 75 IPR002067 GO:0055085
Dod06g0923 309 PRINTS Mitochondrial carrier protein signature 48 61 IPR002067 GO:0055085
Dod06g0923 309 PRINTS Mitochondrial carrier protein signature 179 197 IPR002067 GO:0055085
Dod06g0923 309 PRINTS Mitochondrial carrier protein signature 224 246 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0923 Dod-Chr6 11713889 11722019 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0923 132 307 Chloroplast and Mitochondria Gene Families AT1G07030 33.333 8.51e-20 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0923 K15111 - gmx:100800051 478.404