Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0916 ATGGGGTGTGTTCAGGCCAAGACACTGGAAGATCCTGAGGCTAGGGGCCTAGAGAGGCTCAAACTGGATAATGGGTATGTTGCAAGTTCTGACTTTGTTCCTCACAGGAGATCCACTGGTCAGAGGCATGAACCCAGGGAGGGTGGTGCTAGCCTGCATCATCATCATCATCATCAGAGAGAATTACAACCCAGAAAGCATAGAGATAGAGTTGAGCCTGCAGCTGTTGTTGGCAGTGGTGGTAAGGGGAAAAGGGGTGGTAGAGAGGGGAAGAAGAGAGACGGTGCTGATGTGAATGATGCTAAGAAGTTGTTGCCAAAGAAGGAGGCTTTTGAGGAAGAGAATGAGATAGTTGATGGGTGGCCCAGATGGCTTGTTGACAATGTTCCTGGTGAAGTGTTGTCTGGCTTGGTCCCCAGGAGTGCTGAATCTTACAAAATGATTGATAAGGTAGGGCAAGGAACCTACAGCAATGTTTATAAAGCTCTAGATCGAGACACTAGAGAAATTGTGGCCCTCAAAAAGGTCCGCTTCAATACATCAGAGCCTGAAAGCATTAAATTTATGGCAAGAGAAATCATGATACTACAGAGATTGGATCATCCAAATGTGCTAAAACTTAAGGGATTAGCCACTTCAAGAATGCAATACAGTATATATCTAGTTTTTGATTTCATGCAAACAGATTTAGCGAGAGTTATTTCTTGTTCCGAAGAGAGACTAACTGAACCACAGGTCAAGTGCTATATGCTTCAATTGCTTTCTGGTCTGCAGCATTGCCATGATAGGGGAATTTTACATCGAGATATTAAGGGATCAAACCTTTTGATCGATAAAAATGGGATGCTTAAGATCGCAGATTTTGGGCTTTCCAACTACTATAGTCCAAACCAAGAGCATCCTCTCACAAGCCGGGTTGTAACACTATGGTACAGAGCTCCTGAGTTGTTGTTAGGTGCCACAGATTATGGAGTTGGTATTGATCTATGGAGTGTAGGATGCCTCCTTGCAGAAATGTTTACAGGAATTCCGGTCATGCCTGGCAGAACAGAGGTCGAGCAACTACATAGAATTTTCAGATTATGTGGCACTCCATCGGAGGAGTACTGGAAAAAATTTAAAGTTTCTACAGCTTTTAGACCTCCAAAGTCATATAGACCCAGCTTTGTAGAAACTTTCAGGGATCTCCCACCATCTTCTTTGGGTCTTATATGTACTCTGCTTGCTCTGGACCCTGCATTCCGTGGAAGTGCATCTAAAGCTCTTAAAAATCAGTTTTTCTTTACAAGCCCATTGGCATGTGACCTCTCTGGTCTGCCTGTAATCCACAGAGAAGATGATGAGATTGATCAAGCCAATGAACAGATCAAGTACATGAATTCTAAAATCAGACGTTCTCGTACATATCTGGAGCGTCATAAGAGTTTAGCTCCTAAGAGGCAAATAGAACATACTGTGTCTAACAAAGAGGATTCAAGAAGGAATGCTGAGCCTGAAACTTATGTTCCAAGTGAAGAACCAGGTAGCCCAACCATAAGCAGTACCTCATCTAGTGTAAACCGTGCTGGGGCCAAGGACCACTCGCCTTTATTTCCCTCTCCTCTTCTACCTCCAAATCAAAAGATGGCCTCAAAAGTCCATCACTATGCTAATGGTGGTGAAAATACCAAGAACCTTCCTCCATTACCCTTACCATTGTCAAAACCAAGTGCAACCAAGACAGATGACAACAACAGATACAGAACTGGCCATGCTTTCAGGTCTGCTTCCACCAGAGAATTTAGACACCTTAAACGGGAGGAATATTTACTCTTTGAAATTAATAATTAG 1830 0.4322 MGCVQAKTLEDPEARGLERLKLDNGYVASSDFVPHRRSTGQRHEPREGGASLHHHHHHQRELQPRKHRDRVEPAAVVGSGGKGKRGGREGKKRDGADVNDAKKLLPKKEAFEEENEIVDGWPRWLVDNVPGEVLSGLVPRSAESYKMIDKVGQGTYSNVYKALDRDTREIVALKKVRFNTSEPESIKFMAREIMILQRLDHPNVLKLKGLATSRMQYSIYLVFDFMQTDLARVISCSEERLTEPQVKCYMLQLLSGLQHCHDRGILHRDIKGSNLLIDKNGMLKIADFGLSNYYSPNQEHPLTSRVVTLWYRAPELLLGATDYGVGIDLWSVGCLLAEMFTGIPVMPGRTEVEQLHRIFRLCGTPSEEYWKKFKVSTAFRPPKSYRPSFVETFRDLPPSSLGLICTLLALDPAFRGSASKALKNQFFFTSPLACDLSGLPVIHREDDEIDQANEQIKYMNSKIRRSRTYLERHKSLAPKRQIEHTVSNKEDSRRNAEPETYVPSEEPGSPTISSTSSSVNRAGAKDHSPLFPSPLLPPNQKMASKVHHYANGGENTKNLPPLPLPLSKPSATKTDDNNRYRTGHAFRSASTREFRHLKREEYLLFEINN* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0916 609 MobiDBLite consensus disorder prediction 471 500 - -
Dod06g0916 609 PANTHER CYCLIN-DEPENDENT KINASE 1 571 - -
Dod06g0916 609 Gene3D Phosphorylase Kinase; domain 1 135 227 - -
Dod06g0916 609 MobiDBLite consensus disorder prediction 471 580 - -
Dod06g0916 609 Gene3D Transferase(Phosphotransferase) domain 1 228 466 - -
Dod06g0916 609 SMART serkin_6 145 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0916 609 MobiDBLite consensus disorder prediction 506 523 - -
Dod06g0916 609 MobiDBLite consensus disorder prediction 84 101 - -
Dod06g0916 609 Pfam Protein kinase domain 145 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0916 609 ProSiteProfiles Protein kinase domain profile. 145 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0916 609 MobiDBLite consensus disorder prediction 1 101 - -
Dod06g0916 609 Coils Coil 442 462 - -
Dod06g0916 609 PANTHER CELL DIVISION PROTEIN KINASE 1 571 - -
Dod06g0916 609 MobiDBLite consensus disorder prediction 36 51 - -
Dod06g0916 609 SUPERFAMILY Protein kinase-like (PK-like) 140 431 IPR011009 -
Dod06g0916 609 ProSitePatterns Protein kinases ATP-binding region signature. 151 174 IPR017441 GO:0005524
Dod06g0916 609 ProSitePatterns Serine/Threonine protein kinases active-site signature. 265 277 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0916 Dod-Chr6 11591701 11596259 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0916 140 441 Core Cell Cycle Gene Families AT5G10270 46.250 4.15e-89 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Dod06g0916 Pkinase 4.7e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0916 K08819 - gmx:100776854 853.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0916 06 11591701 11596259 Dod06g0916 06 11591701 11596259 ECH