Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0913 ATGGATCACACCCTGCAAGGCGTCTTAGCCGCCGCCGCCAGCTTCGTCGTCATCACCCTCCTCTTCGCCGCCGTCATCCTCGCCTGCCAGAGCCGCCGCCGCCGCAAATCCCCAAAACTCCCAACCCACAGCCGCCGCAACAACCCAACCCGAACCCGACCCGCATCGAACCACCACCCTCCCTCCCAACCACCGTGCCTCTCATCGTTCTCCACCGACACAAGCTGCTCCTTCGACCCAAACCTCAAGATCTCCATGGAGGAGCTCGCACGCGCCACCGACAACTTCTCCCCTCGCCTCATCGTCGGCGACGGCAGCTTCGGCCTCGTCTACAAGGCCCGCCTCTCCTCCGGGGCCCTCGTCGCCGTCAAGAAGCTCTCCCCTGATGCCTTCCAAGGCTTCCGCGAATTCACCGCCGAGATGGAAACCCTAAGCAAGCTCCTCCACCCAAACATCGTCAAGATCCTCGGCTTCTGGGCCTCCGGGCCCGAACGCCTACTCGTCTACGAGTTCATCCAACGTGGAAACCTCGATCAGTGGCTCCACGAGCCCAGCACCGGGCCCGACAACCAAGACCGCTCTAACGACCACGACGGTTATAACGAGCTGCGTTTACCGTTATCCTGGGAGACTAGAGTCAAGATCATCAGAGGCGTGGCCCGTGGGCTTTGCTACTTGCACGGGCTTGAAACGCCCGTGATCCATAGGGATATTAAGGCGAGCAATGTTTTGTTGGACTCTGAGTTCGAGGCCCATATTGCTGATTTTGGGCTTGCAAGGCATATCGAGGCCTCGCAGACGCACGTGTCGACGCAGTTCGCGGGGACTATGGGCTACATGCCTCCGGAATATAGGGATGGGGTTAATGTGGCTAACCAGAAGGTTGATGTGTACAGCTTTGGGGTGTTGATGGTGGAGACTGCGTCTGGGAAGAGGACCAATTTGCCTGTGAAGTTGGATGATGACGAAATTGGGCTGGTCCAATGGGCCAGGAAGATGAAGGAGAGGGGCACTGAGATGATGATGGTTGATGTGAATATTTCCAGGGAAGCGTTGAGGGAAGAGAGTGTGAAGGAGTATGTGAGGATTGCTTGTATGTGCATTGGTGAGTTGCAGAAGGAGAGGCCTGAGATGGATGAGGTTGTTAAATTGTTGGACTCAATGCCTGGTTTGACAAAAATGATGTACATAGCTGCCACGGTGTGTAGGATCGATTAG 1218 0.5665 MDHTLQGVLAAAASFVVITLLFAAVILACQSRRRRKSPKLPTHSRRNNPTRTRPASNHHPPSQPPCLSSFSTDTSCSFDPNLKISMEELARATDNFSPRLIVGDGSFGLVYKARLSSGALVAVKKLSPDAFQGFREFTAEMETLSKLLHPNIVKILGFWASGPERLLVYEFIQRGNLDQWLHEPSTGPDNQDRSNDHDGYNELRLPLSWETRVKIIRGVARGLCYLHGLETPVIHRDIKASNVLLDSEFEAHIADFGLARHIEASQTHVSTQFAGTMGYMPPEYRDGVNVANQKVDVYSFGVLMVETASGKRTNLPVKLDDDEIGLVQWARKMKERGTEMMMVDVNISREALREESVKEYVRIACMCIGELQKERPEMDEVVKLLDSMPGLTKMMYIAATVCRID* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0913 405 PANTHER RECEPTOR SERINE-THREONINE PROTEIN KINASE 1 387 - -
Dod06g0913 405 Gene3D Transferase(Phosphotransferase) domain 1 172 396 - -
Dod06g0913 405 MobiDBLite consensus disorder prediction 43 71 - -
Dod06g0913 405 Pfam Protein tyrosine and serine/threonine kinase 102 385 IPR001245 GO:0004672|GO:0006468
Dod06g0913 405 Gene3D Phosphorylase Kinase; domain 1 67 171 - -
Dod06g0913 405 SUPERFAMILY Protein kinase-like (PK-like) 78 385 IPR011009 -
Dod06g0913 405 ProSitePatterns Protein kinases ATP-binding region signature. 102 125 IPR017441 GO:0005524
Dod06g0913 405 PANTHER OS01G0253100 PROTEIN 1 387 IPR045271 GO:0004714|GO:0006468
Dod06g0913 405 MobiDBLite consensus disorder prediction 35 71 - -
Dod06g0913 405 ProSitePatterns Serine/Threonine protein kinases active-site signature. 233 245 IPR008271 GO:0004672|GO:0006468
Dod06g0913 405 ProSiteProfiles Protein kinase domain profile. 96 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0913 405 SMART serkin_6 96 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0913 405 CDD STKc_IRAK 102 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0913 Dod-Chr6 11570488 11573419 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0913 80 388 Receptor kinase-like Gene Family AT5G07280 44.194 9.85e-73 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Dod06g0913 PK_Tyr_Ser-Thr 5.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0913 - - lang:109335579 525.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0913 06 11570488 11573419 Dod06g0913 06 11570488 11573419 ECH