Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0911 ATGGACCCTCATGCAGAAGAGTTTTCTCGATACATACATATAAATCAGAATGAATTTTTGACACGAAGGCATAAAAAGCAGAAGGAGGTGGATATTGCCATATGTGAATGCAAATATGATGCCGATGACCCTGATAGTGCATGTGGGGATAGCTGCCTGAATGTTTTGACCAGCACTGAATGCACTCCAGGTTATTGCCCATGTGGTGACTTTTGCAAAAATCAGAGATTTCAGAAGTGTGAATATGCAAAAACAAAGTTGTTTAAAACTGAAGGCCGAGGATGGGGTCTTTTGGCTGATGAGAACATTAAGGCAGGACAATTTGTCATTGAATACTGCGGAGAAGTAATATCATGGAAAGAAGCCAAACGTAGAGCCCAGGCTTATGAGATTCAAGGTCTTAAGGATGCATTTATCATTTCCCTTAATGCCTCTGAATCTATTGATGCAACTAGAAAGGGAAGCCTTGGCAGATTTATAAATCATTCCTGGTTCGCTGCCTCTGTGGCGCACTCAAATGTTCTGGATTTCTTGGAGCAAAATCTCGTGGTTTTCAGGAAGATACTTATCTATGGGAAGATGATGATGAAAGGTTGCTGCTGA 603 0.4113 MDPHAEEFSRYIHINQNEFLTRRHKKQKEVDIAICECKYDADDPDSACGDSCLNVLTSTECTPGYCPCGDFCKNQRFQKCEYAKTKLFKTEGRGWGLLADENIKAGQFVIEYCGEVISWKEAKRRAQAYEIQGLKDAFIISLNASESIDATRKGSLGRFINHSWFAASVAHSNVLDFLEQNLVVFRKILIYGKMMMKGCC* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0911 200 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 9 164 - -
Dod06g0911 200 Gene3D SET domain 2 189 IPR046341 -
Dod06g0911 200 Pfam SET domain 94 164 IPR001214 GO:0005515
Dod06g0911 200 PANTHER SET DOMAIN PROTEINS 9 164 - -
Dod06g0911 200 SUPERFAMILY SET domain 10 164 IPR046341 -
Dod06g0911 200 Pfam AWS domain 42 80 IPR006560 GO:0005634|GO:0018024
Dod06g0911 200 ProSiteProfiles SET domain profile. 83 200 IPR001214 GO:0005515
Dod06g0911 200 SMART set_7 83 198 IPR001214 GO:0005515
Dod06g0911 200 SMART shorttest3 30 82 IPR006560 GO:0005634|GO:0018024
Dod06g0911 200 ProSiteProfiles AWS domain profile. 30 81 IPR006560 GO:0005634|GO:0018024
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0911 Dod-Chr6 11565193 11567664 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0911 65 194 C2H2 Transcription Factor Family AT2G23740 35.417 6.15e-18 79.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Dod06g0911 SET 1.2e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0911 - - lang:109335575 311.612