Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod06g0889 | ATGCAGCTTGGAGACCCAAGAGTGTTGGAGACCTCCTCCGGCGAGGCGATGGCGGGGGAAGCGGCTCCGCCGGAGGGTGGTGAGGCCATTGGGGAGGGCGGTGGCGGCGGCTGCAGTGGAGGTGATGAGGGTGACAAGATCAACTTTGGAGGAAACCGGTGGCCCCGCCAAGAAACTTTGGCTCTCTTGAAGATAAGGTCGGATATGGATGCTGTATTTAGAGATTCAAGTCTCAAGGGTCCACTCTGGGAAGAAGTCTCAAGGAAACTAGCAGAACTTGGTTATCACCGAAGCGCAAAGAAGTGCAAGGAGAAATTTGAGAACGTTTACAAGTACCACAAGAGAACCAAAGAGAGCCGAAGTGGCAAATCGGAAGGAAAAACCTACAAATACTTTGACCAATTACAAGCCCTCGAGAACCAATTCACAGTCTCATCTTACCCGCCAAAGTCACAACCTACTACTCCTAGTACCAATACTTCCACTTTGGCAACAAACATAGTGACATTATTGCCAACAAGGCCTAGTACTAGTGACACCACCACCACAACACCACCACCTATCCCTTTTGCCACCACTGTTCCATCCACAAACCCTACGGTCATTTCTCCCTCACCACCACCAACCAGTGCCACCACCACCACAATCACTTCCACAACCAACCCTAGAAACCCATCATCACAAGCCAACACCAATAACAACAATAATAATGTCTCGCACTCTTTGCCCAACATGAACCTTTTCTCTTCTGCCTCGACCTCCTCTTCCACGGCCTCTGACGAGGACTTGGAGGAGAAGTACAGGAAGAAGAGGAAGTGGAAGGAGTACTTCCGGAGGCTCACGAGGCAGGTCTTGGCAAAGCAAGAGGAGATGCAGAAGAGGTTCTTGGAAGCCATAGACAAAAGGGAAAGGGAACAAGTGGCACAACAAGATGCTTGGAGGATGCAAGAGATGGCAAGGATCAATAGAGAGCATGAGATTCTTGTCCAAGAGAGATCAACGGCGGCAGCAAAAGACGCATCAGTTATTGCATTCCTTCAGAAGCTATCAGGTCAACAAAGCCCCATAACAACACAGGTTTCAACATTAATACCATTTGGTGGCAATTTCGTCCAACAACTACCACCACCACCGCAAACACAACAACATCAGCAACCATTGCAACCACCACCACAACAACCTGTGTCACAAGTACAACCACAACAGCAGCAGCAGCAACTGCAGCCACAGGCGCCATTGATGCCAAACAACAACAACCACCTTGAAGTCCAGAAAGTGAATAACGGTCACAGTGGTGCTCCATTGATGAGCCCTTCAAGGTGGCCAAAGGCTGAAGTTCATGCTTTGATAAGGCTTAGGACGAGTCTTGAAGCTAAGTATCAGGAGAATGGACCAAAAGCTCCTTTGTGGGAAGATATATCAGCTGGGATGCAGAGGCTAGGATACAATAGGAGTGCCAAGAGATGCAAGGAGAAGTGGGAGAACATCAACAAGTACTTCAAGAAAGTCAGGGAGAGCAAGAAGCAAAGGCGCGAGGATAGCAAAACATGTCCTTATTTTCAGGAGCTTGATGCTCTATACAAAGAAAAGAGCAAAAACCAGCACCCCTTTGGGTCCTCATTTCAACACATGAAGCCGAATGAGATGATGGAGCCATTGATGGTGCAACCGGAGCAGCAATGGAGGCCTCCCCCTCAGTACGAACAGCATGAGCAGCAAATGGAAGAAGGTTATCATGAGGTGAAGAACAATAACAATAATAATGGTGGTAACAACAATGCATGTCAATATGAAGCAAAAGAAAGAGAAACACAAAGAGATGATGATGAAGGAGATGATGAAGAAGAAGTAGATGATAACGGTGATGCTGATGGAGAAGATGGAGATAGTGTGGAGGATGAAGGAGGTAATTGCCGTTATGAGATTGCGACAAATAAACTTTCTTCAGTGGACACCGTTGAATGA | 1965 | 0.4758 | MQLGDPRVLETSSGEAMAGEAAPPEGGEAIGEGGGGGCSGGDEGDKINFGGNRWPRQETLALLKIRSDMDAVFRDSSLKGPLWEEVSRKLAELGYHRSAKKCKEKFENVYKYHKRTKESRSGKSEGKTYKYFDQLQALENQFTVSSYPPKSQPTTPSTNTSTLATNIVTLLPTRPSTSDTTTTTPPPIPFATTVPSTNPTVISPSPPPTSATTTTITSTTNPRNPSSQANTNNNNNNVSHSLPNMNLFSSASTSSSTASDEDLEEKYRKKRKWKEYFRRLTRQVLAKQEEMQKRFLEAIDKREREQVAQQDAWRMQEMARINREHEILVQERSTAAAKDASVIAFLQKLSGQQSPITTQVSTLIPFGGNFVQQLPPPPQTQQHQQPLQPPPQQPVSQVQPQQQQQQLQPQAPLMPNNNNHLEVQKVNNGHSGAPLMSPSRWPKAEVHALIRLRTSLEAKYQENGPKAPLWEDISAGMQRLGYNRSAKRCKEKWENINKYFKKVRESKKQRREDSKTCPYFQELDALYKEKSKNQHPFGSSFQHMKPNEMMEPLMVQPEQQWRPPPQYEQHEQQMEEGYHEVKNNNNNNGGNNNACQYEAKERETQRDDDEGDDEEEVDDNGDADGEDGDSVEDEGGNCRYEIATNKLSSVDTVE* | 655 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod06g0889 | 654 | MobiDBLite | consensus disorder prediction | 170 | 187 | - | - | |
Dod06g0889 | 654 | PANTHER | TRIHELIX TRANSCRIPTION FACTOR GT-2 | 38 | 642 | - | - | |
Dod06g0889 | 654 | CDD | GT1 | 52 | 117 | - | - | |
Dod06g0889 | 654 | MobiDBLite | consensus disorder prediction | 170 | 266 | - | - | |
Dod06g0889 | 654 | MobiDBLite | consensus disorder prediction | 1 | 52 | - | - | |
Dod06g0889 | 654 | MobiDBLite | consensus disorder prediction | 368 | 422 | - | - | |
Dod06g0889 | 654 | PANTHER | - | 38 | 642 | - | - | |
Dod06g0889 | 654 | MobiDBLite | consensus disorder prediction | 397 | 422 | - | - | |
Dod06g0889 | 654 | ProSiteProfiles | Myb-like domain profile. | 433 | 497 | IPR001005 | - | |
Dod06g0889 | 654 | CDD | GT1 | 439 | 504 | - | - | |
Dod06g0889 | 654 | MobiDBLite | consensus disorder prediction | 558 | 654 | - | - | |
Dod06g0889 | 654 | MobiDBLite | consensus disorder prediction | 207 | 258 | - | - | |
Dod06g0889 | 654 | MobiDBLite | consensus disorder prediction | 379 | 396 | - | - | |
Dod06g0889 | 654 | ProSiteProfiles | Myb-like domain profile. | 46 | 110 | IPR001005 | - | |
Dod06g0889 | 654 | Pfam | Myb/SANT-like DNA-binding domain | 439 | 526 | IPR044822 | - | |
Dod06g0889 | 654 | Pfam | Myb/SANT-like DNA-binding domain | 52 | 138 | IPR044822 | - | |
Dod06g0889 | 654 | Gene3D | - | 441 | 502 | - | - | |
Dod06g0889 | 654 | Gene3D | - | 54 | 115 | - | - | |
Dod06g0889 | 654 | MobiDBLite | consensus disorder prediction | 607 | 631 | - | - | |
Dod06g0889 | 654 | Coils | Coil | 567 | 587 | - | - | |
Dod06g0889 | 654 | MobiDBLite | consensus disorder prediction | 579 | 598 | - | - | |
Dod06g0889 | 654 | SMART | sant | 437 | 499 | IPR001005 | - | |
Dod06g0889 | 654 | SMART | sant | 50 | 112 | IPR001005 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod06g0889 | Dod-Chr6 | 11314688 | 11318654 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod06g0889 | 31 | 560 | Trihelix Transcription Factor Family | AT1G76890 | 46.642 | 4.69e-141 | 422 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | Trihelix | Dod06g0889 | Myb_DNA-bind_4 | 4.6e-22 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod06g0889 | - | - | gsj:114370603 | 655.981 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Dod02g2917 | 02 | 61582567 | 61586354 | Dod06g0889 | 06 | 11314688 | 11318654 | PCT |