Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0885 ATGGAAGGAAATTTGTCACAGGGAGGTTTGATTCAAGGTGGGACTTCTTTTGGTGGCTTTGAGTTGCCAGGATCAATTAGGGTTCATCACCAGGCACAGCATCCCCATACCATGCACCAGCATCAAACTCTTCCGCGTCAAGGGTCTTCTGTACATTCCTCGGTTCATGATGGTTTTCCTCTTACAATGGGAACCTTGCAGAACTGTGATCAAACCATTCCACTGACAGACTTCGGTAAGGGAGAAAGAAGCAAAAACTCGGGAAGTGAGGAAGATGAGCCAAGTCTAACTGAGGATGGTGGTGATGGTCACCATGAAGCTGGTAGAGGTAAAAAGGGCTCGCCTTGGCAGCGGGTGAAGTGGACTGATAAGATGGTAAGGCTTCTGATAACGGCTGTTTCTTATATAGGGGAGGATGGAACTTCTGATGGCAGTGGCGGAGGAAGAAGAAGATTTGCAGTCCTACAGAAGAAAGGTAAGTGGAAATCTGTTTCTAAAGTTATGGCCGAAAGGGGTTATCATGTTTCTCCTCAGCAGTGTGAGGATAAATTCAATGATCTTAATAAAAGGTATAAAAAACTTAATGATGTGCTTGGGAGGGGCACTTCTTGTCAGGTTGTCGAAAATCCTTCGCTGTTGGATGTAATAGATTATCTTTCTGAGAAGGAAAAGGATGACGTTCGGAAAATACTAAGCTCAAAACACCTGTTCTATGAAGAGATGTGTTCTTACCATAATGGTAATAGATTGCATTTACCCCATGATCCTGCGTTGCAACGTTCACTGCAGTTAGCGCTCCGGAATAGAGATGATCATGATAATGATGATCTGAGAAAGTCCCATCATGATGATCACGATGAAGATGATCAAGATGAAGAATTCGATGATCATGATGACTTCGAAGAGAATTATGCTTCCCAAGGAGATAGCAGAGGAACATATGTGCCTTTAGGTTCCATGAAGAAATTGAAACAAGGACATGGCCAAGAAGATGCTACTACTTTTGGTAGTACTTTAAGTTGTCAGCACTACAACAGAAGTTCATATCCCCATGGACAGATGGCCCAACCTGATGTGAACCAAGGTTTACCTGAAAGCATGAAAACAGCTTGGTTACAGAAGCAATGGGTTGAATCTCGCTCACTTCAATTAGAAGAACAGAAGCTACAAATACAGGTTGAGATGTTGGAACTAGAGAAACAGAGACTAAAGTGGCAGAAGTTTAGCAAGAAAAAGGACAGGGAGTTGGAGAAGCTGAGTCTGGAAAATGAAAGAATGAAGCTGGAAAATGAACGTATTGCTTTAGAGCTGAAGCGAAAGGAAATGGGCATCGGCTTTAACTAG 1344 0.4286 MEGNLSQGGLIQGGTSFGGFELPGSIRVHHQAQHPHTMHQHQTLPRQGSSVHSSVHDGFPLTMGTLQNCDQTIPLTDFGKGERSKNSGSEEDEPSLTEDGGDGHHEAGRGKKGSPWQRVKWTDKMVRLLITAVSYIGEDGTSDGSGGGRRRFAVLQKKGKWKSVSKVMAERGYHVSPQQCEDKFNDLNKRYKKLNDVLGRGTSCQVVENPSLLDVIDYLSEKEKDDVRKILSSKHLFYEEMCSYHNGNRLHLPHDPALQRSLQLALRNRDDHDNDDLRKSHHDDHDEDDQDEEFDDHDDFEENYASQGDSRGTYVPLGSMKKLKQGHGQEDATTFGSTLSCQHYNRSSYPHGQMAQPDVNQGLPESMKTAWLQKQWVESRSLQLEEQKLQIQVEMLELEKQRLKWQKFSKKKDRELEKLSLENERMKLENERIALELKRKEMGIGFN* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0885 447 Pfam Myb/SANT-like DNA-binding domain 118 244 IPR044822 -
Dod06g0885 447 MobiDBLite consensus disorder prediction 271 286 - -
Dod06g0885 447 MobiDBLite consensus disorder prediction 30 116 - -
Dod06g0885 447 MobiDBLite consensus disorder prediction 271 295 - -
Dod06g0885 447 MobiDBLite consensus disorder prediction 37 74 - -
Dod06g0885 447 Gene3D - 121 193 - -
Dod06g0885 447 PANTHER FACTOR, PUTATIVE-RELATED 1 447 - -
Dod06g0885 447 MobiDBLite consensus disorder prediction 83 116 - -
Dod06g0885 447 PANTHER F16F4.11 PROTEIN-RELATED 1 447 - -
Dod06g0885 447 Coils Coil 409 441 - -
Dod06g0885 447 Coils Coil 379 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0885 Dod-Chr6 11169712 11172309 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Dod06g0885 Myb_DNA-bind_4 7.6e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0885 - - pvu:PHAVU_007G079600g 749.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0885 06 11169712 11172309 Dod06g0885 06 11169712 11172309 ECH
Dod02g2919 02 61633631 61635987 Dod06g0885 06 11169712 11172309 PCT