Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0879 ATGGGACGGAAGAAGCCGACGGCACGCGACGAAGAGAACCCGGCGGCGGCGGCGGCATCGCAGGGCGGCGGGAAATCGAAGAAGAAGGCGCACGTAATCGACGATGATGAGTACTCCATCGGAACCGATCTCTCCGAGGAGCCTGCTGCGGCGGCGCCAGAGCCAGAGGAGAAGGCGGGGGCGGCGGTGCCAGCTGGCAAGAAGAAGGGCAAAAAGGGGAATGACAAAGGTGGGAAGGCAAAGGGTAAGGATGATGATGATGATGAAGATGATGTGGCGATTGGTGGTGGTGATAATGGTGATGACGATGAAGAAGAAGTTGTATTTGCTGGGAAGAAGAAGAAGGGGAAATCAAAGAAAGGTGGTGGGGGGAGTGTGTTCAGTACATCAAGTTTTGGTTTCCTTGGTGATGATGGTGAAGGTGGTGGTGGTGATGATGAAGATGATGAGAAATCAGGGTTAACTGGTGATGGTGATGGCGATGAGGAGGAGGAACCTGTGGCTAGTTTTACAGGTAAGAAGAAGCCCTCTAAAGGCTCAAAGAAAGGTGGTGGTGGCAGTGTTGATGCTATTGACGATGATAATGATGGTGGGGAGGAGGAGGATGAGCCGGTGGTTAGTTTTACCGGTAAGAAGAAGCCGTCGAAGGGATCAAAGAAAGGTGGTGGTGGCAGTTTGTTCACTGCCTCGGCCTTTGATGCTATTGATGGTGATGATGATGGTGGTGGTGAGGTGGTGGATGATAAGGATGAACAGGTTATTGCTTTTACCGGGAAGAAGAAGTCCTCCAAAGGTGGCAAGAAGGGTGGTGCTGCGTTTTTGGCTGCTAGTTTTTGTGATATTGATGATGGGGAGGAGTCTAAGAATGAGAAAGAGGATGACGATGATGAGGACATAGGGCCAATCACTTTCTCTGGTAAGAAAAAGAAGTCGTCGAAGTCTTCTAAGAAGGCTTCATTTAGTTCACCTTTGGCCGATGGGGAAGATGTTTCTGTAGCTGAGCCTGCTATAGGTGGTGATGACAAGGATGAGGATGATGTTTCTGCGTTTGCTTTTTCGGGTAAGAAGAAGTCTTCTAAAAAGAAAGGCAGTGGTGCTGCTTCTAAAGTCAGTGATGAAATTGGGTTTGGGGGCGAAAGTGTAGGTGTTGCTGAGCCTGAGCAACCTAGCGTTGGAATTAGTAATGCTGATGCTGACAACAATGTAAATAAGAGTGAGGAAGTCATTGAAACTTCAAAAAATAAGAAGAAGAAGAAGAATAAGAGTGGAAGAACTGCTCAGGAGGAGGAAGATTTAGACAAGATTCTTGCAGAGCTTGGTGAGGGCCCTTCCATAGCAAAACCTGCTGCTCCTCCTCCGCAGGACGATAAGGTTCAGCAGGAAGATAAGGCTCAGCCTGTGCTGGAAGGAGGTTCTGCTGCTGATGCTTCCGGTGAAAAGGAGGGGGAAGATGAGACTGTAGAGTCAGCTGCTGCAAAGAAGAAGAAAAAGAAGAAGGAAAAGGAAAAGGAGAAGAAGGCTGCGGCTGCAGCTGCTGCTGCAGCAGCTGGAAGTGCACCAGAAATTGAAGCCGAAGAAGTTAAAGCCGAGCCGGTTGAAACAAAGAAGAATGATTCAAAGACTAAATCAGCTGACAAGAAAGTGCCCAAGCATGTTAGGGAGATGCAAGAGGCATTAGCTCGAAGAAAAGAGGCCGAAGAGAAAAAGAAGAAAGAAGAGGAGCAGAGGTTAAGGAAGGAAGAAGAGGAGCGGCGCAGGCAGGAGGAGCTTGAGAGACAGGCAGAAGAGGCTAAACGCCGGAAGAAGGAAAAAGAAAAGGAGAAGCTCCAGAGAAAGAAGCAAGAAGGTAAATTGCTAACTGGTAAACAGAAAGAAGAAGCCCGCCGTCTGGAGTTAATGAGGAAGCAGTTTCTTAATAGCACAGGAGGTGTGACACTCCCTGGTGGGGACTCTGGTGCGCCAGCCAAAAGGCCCGTATATCAGACAAAGAAGTCAAAACCAGCCCATCATTATCATCAGAATGGTGCTGCTGCTGTTGAGACGGCAGAAAGTGTTGAAGCGAAGGAGATTCAGGAGACTGCCACTGATGCTGGTTCAGAGGAACCAGAAAAGGTTGAGGAAGTGGAGGCAGATCAGGCAGAGGAGAAAGTTGAACTTCCTGAAGCTGTTGAAGATAATGGAGTAGAAGAAGATGATGATGTAGAGGATGAATGGGATGCAAAAAGCTGGGATGATGTTAACCTCAGTGCCAAGGGTGCATTTGCTGATGAAGAGGTTGACTCTGAGCCTGAACCAATTGTCAAAAAGGAGATAAAAAATGCTGTAACTACTCACAATAGTGCTGCTACAAAGAAAACAGTTTCTAAGCCTGTTGCCGAAGAAATTGAAGGTAGAAAGCAGGCTAATGCTGTGGTTGCAGATAGAAATAAAAAGCAGGATCCAGACTCAAGAAAGGGACCTCCAAAGTCTACACAGAAGTCTGCTGCACCTCCTAAGCCTAGTGAAGACAACCTCCGGTCCCCAATTTGCTGTATCATGGGGCATGTGGATACCGGCAAAACCAAGCTGCTGGATTGTATTCGTGGTACTAATGTTCAAGAGGGTGAGGCCGGTGGTATCACGCAGCAGATTGGTGCAACATATTTTCCTGCTGATAATATACGTGAAAGAACAAAGGAATTGAAAGCTGATGCAAAGCTAAAAGTTCCTGGTCTCCTGGTTATTGATACACCAGGGCACGAATCATTTACTAACTTAAGGTCTCGAGGTTCAGGATTATGCGATATTGCCATTTTGGTTGTTGACATTATGCATGGCTTAGAGCAACAAACAATTGAATCACTCAATCTATTAAAAATGAGGAATACAGAATTCATTGTTGCATTGAATAAGGTTGACAGGCTTTATGGGTGGAAAACATGTCGGAATGCTCCAATTATTAAAGCGCTGAAGCAGCAGACTAAGGATGTTCAGAATGAGTTCAATATGAGGCTCACTCAGATTGTTACTCAATTCAAGGAACAGGGGCTAAATACTGAGTTGTATTATAAAAACAAGGAAATGGGAGAAACATTCAACATTGTTCCAACAAGTGCAATAAGTGGTGAAGGAGTCCCAGATTTGTTATTACTGTTGGTTCAATGGACCCAAAAAACAATGGTTGAGAAACTTACTTACAGCGAAGAAGTGCAGTGTACTGTCTTGGAGGTCAAGGTTGTTGAAGGCCATGGAACCACTATCGATGTTGTTTTAGTTAACGGTGTTCTTCATGAAGGAGATCAAATAGTCGTCTGTGGAATGCAGGGGCCAATTGTTACAACAATTCGAGCTTTATTGACACCACATCCAATGAAAGAACTCCGTGTTAAGGGAACATTTCTCCATCACAAAAAAATCAAAGCTGCAATGGGTATAAAGATCACTGCCCAGGGGCTTGAACATGCTATTGCTGGCACTGGTTTATACGTGGTGAAGCCCAATGATGATTTGGAAGATGTTAAAGAAGCCGCAATGGAAGATATGCGATCAGTCATGAGTAGGATTGATAGGAGTGGTGAGGGAGTTTGTGTGCAGGCATCTACCCTTGGCTCATTGGAAGCATTACTGGAGTTTTTGAAAACTCCGGAAGTGAATATTCCTGTTAGTGGTATAAGCATAGGCCCTGTACACAAAAAGGATGTAATGAAGGCAAGTGTCATGCTTGAAAAGAAACGAGAGTATGCTACTATATTGGCATTTGATGTCAAAGTCACTCCTGAGGCTAGGGAACTTGCAGATGAATTGGGTGTGAAAATTTTTATTGCGGATATCATTTATCATCTGTTTGATCAATTTAAGGCCTATATTGACAACATTAAGGAGGAGAAAAAGAGAGAATCTGCTGATGAGGCAGTCTTCCCATGTGTTCTGAAAATTTTACCAAATTGCATTTTCAACAAGAAGGATCCGATTGTTTTGGGAGTTGATGTCCTTGAAGGCATTGCAAAGGTCGGGACTCCAATTTGTGTTCCTTCTAGAGAGTTCATTGACATTGGTCGCATTGCCTCCATTGAGAATAACCATAAGCCAGTTGATTATGCAAAGAAAGGGCAGAAAGTAGCCATGAAGATTGTTGGTAGCAATCCTGAGGAGCAACAGAAAATGTTTGGGCGGCATTTTGAGATTGATGATGAACTTGTAAGCCATATTTCACGGAACTCTATCGATGTACTCAAAGCTAATTACCGGGATGATCTGTCCAATGACGAATGGAGGCTGCTTGTGAAATTGAAGAATGTTTTCAAGATACAATGA 4293 0.45 MGRKKPTARDEENPAAAAASQGGGKSKKKAHVIDDDEYSIGTDLSEEPAAAAPEPEEKAGAAVPAGKKKGKKGNDKGGKAKGKDDDDDEDDVAIGGGDNGDDDEEEVVFAGKKKKGKSKKGGGGSVFSTSSFGFLGDDGEGGGGDDEDDEKSGLTGDGDGDEEEEPVASFTGKKKPSKGSKKGGGGSVDAIDDDNDGGEEEDEPVVSFTGKKKPSKGSKKGGGGSLFTASAFDAIDGDDDGGGEVVDDKDEQVIAFTGKKKSSKGGKKGGAAFLAASFCDIDDGEESKNEKEDDDDEDIGPITFSGKKKKSSKSSKKASFSSPLADGEDVSVAEPAIGGDDKDEDDVSAFAFSGKKKSSKKKGSGAASKVSDEIGFGGESVGVAEPEQPSVGISNADADNNVNKSEEVIETSKNKKKKKNKSGRTAQEEEDLDKILAELGEGPSIAKPAAPPPQDDKVQQEDKAQPVLEGGSAADASGEKEGEDETVESAAAKKKKKKKEKEKEKKAAAAAAAAAAGSAPEIEAEEVKAEPVETKKNDSKTKSADKKVPKHVREMQEALARRKEAEEKKKKEEEQRLRKEEEERRRQEELERQAEEAKRRKKEKEKEKLQRKKQEGKLLTGKQKEEARRLELMRKQFLNSTGGVTLPGGDSGAPAKRPVYQTKKSKPAHHYHQNGAAAVETAESVEAKEIQETATDAGSEEPEKVEEVEADQAEEKVELPEAVEDNGVEEDDDVEDEWDAKSWDDVNLSAKGAFADEEVDSEPEPIVKKEIKNAVTTHNSAATKKTVSKPVAEEIEGRKQANAVVADRNKKQDPDSRKGPPKSTQKSAAPPKPSEDNLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPADNIRERTKELKADAKLKVPGLLVIDTPGHESFTNLRSRGSGLCDIAILVVDIMHGLEQQTIESLNLLKMRNTEFIVALNKVDRLYGWKTCRNAPIIKALKQQTKDVQNEFNMRLTQIVTQFKEQGLNTELYYKNKEMGETFNIVPTSAISGEGVPDLLLLLVQWTQKTMVEKLTYSEEVQCTVLEVKVVEGHGTTIDVVLVNGVLHEGDQIVVCGMQGPIVTTIRALLTPHPMKELRVKGTFLHHKKIKAAMGIKITAQGLEHAIAGTGLYVVKPNDDLEDVKEAAMEDMRSVMSRIDRSGEGVCVQASTLGSLEALLEFLKTPEVNIPVSGISIGPVHKKDVMKASVMLEKKREYATILAFDVKVTPEARELADELGVKIFIADIIYHLFDQFKAYIDNIKEEKKRESADEAVFPCVLKILPNCIFNKKDPIVLGVDVLEGIAKVGTPICVPSREFIDIGRIASIENNHKPVDYAKKGQKVAMKIVGSNPEEQQKMFGRHFEIDDELVSHISRNSIDVLKANYRDDLSNDEWRLLVKLKNVFKIQ* 1431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0879 1430 MobiDBLite consensus disorder prediction 523 633 - -
Dod06g0879 1430 CDD IF2_aeIF5B_IV 1301 1396 - -
Dod06g0879 1430 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 838 1054 IPR000795 GO:0003924|GO:0005525
Dod06g0879 1430 SUPERFAMILY Translation proteins 1297 1429 IPR009000 -
Dod06g0879 1430 MobiDBLite consensus disorder prediction 779 839 - -
Dod06g0879 1430 CDD IF2_eIF5B 841 1051 - -
Dod06g0879 1430 MobiDBLite consensus disorder prediction 1 248 - -
Dod06g0879 1430 MobiDBLite consensus disorder prediction 335 351 - -
Dod06g0879 1430 MobiDBLite consensus disorder prediction 685 701 - -
Dod06g0879 1430 MobiDBLite consensus disorder prediction 140 165 - -
Dod06g0879 1430 MobiDBLite consensus disorder prediction 789 820 - -
Dod06g0879 1430 Gene3D - 1182 1286 IPR036925 -
Dod06g0879 1430 Coils Coil 487 512 - -
Dod06g0879 1430 MobiDBLite consensus disorder prediction 282 745 - -
Dod06g0879 1430 Coils Coil 395 415 - -
Dod06g0879 1430 MobiDBLite consensus disorder prediction 87 105 - -
Dod06g0879 1430 Pfam Elongation factor Tu GTP binding domain 842 1050 IPR000795 GO:0003924|GO:0005525
Dod06g0879 1430 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 1163 1292 IPR036925 -
Dod06g0879 1430 PRINTS GTP-binding elongation factor signature 842 855 IPR000795 GO:0003924|GO:0005525
Dod06g0879 1430 PRINTS GTP-binding elongation factor signature 906 916 IPR000795 GO:0003924|GO:0005525
Dod06g0879 1430 PRINTS GTP-binding elongation factor signature 922 933 IPR000795 GO:0003924|GO:0005525
Dod06g0879 1430 PRINTS GTP-binding elongation factor signature 958 967 IPR000795 GO:0003924|GO:0005525
Dod06g0879 1430 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 838 1129 IPR027417 -
Dod06g0879 1430 MobiDBLite consensus disorder prediction 709 723 - -
Dod06g0879 1430 Coils Coil 548 619 - -
Dod06g0879 1430 MobiDBLite consensus disorder prediction 724 740 - -
Dod06g0879 1430 Pfam Elongation factor Tu domain 2 1077 1152 IPR004161 GO:0005525
Dod06g0879 1430 PANTHER PHOTOSYSTEM II PROTEIN D1 1 1430 - -
Dod06g0879 1430 CDD aeIF5B_II 1062 1172 - -
Dod06g0879 1430 MobiDBLite consensus disorder prediction 422 437 - -
Dod06g0879 1430 MobiDBLite consensus disorder prediction 61 86 - -
Dod06g0879 1430 Gene3D Translation factors 1293 1430 - -
Dod06g0879 1430 MobiDBLite consensus disorder prediction 476 495 - -
Dod06g0879 1430 Gene3D Translation factors 1061 1181 - -
Dod06g0879 1430 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 1 1430 IPR015760 -
Dod06g0879 1430 Gene3D - 832 1060 IPR027417 -
Dod06g0879 1430 TIGRFAM small_GTP: small GTP-binding protein domain 843 967 IPR005225 GO:0005525
Dod06g0879 1430 Pfam Translation-initiation factor 2 1165 1279 IPR023115 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0879 Dod-Chr6 11115929 11125068 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0879 1 44 Eukaryotic Initiation Factors Gene Family AT1G76810 60.870 3.02e-06 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0879 K03243 - gmx:100814875 1687.55