Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0876 ATGGAGAAGAACATAGCAGTTACTTCCATTCCTGCAGCTCATGCCACGGACCAGTTGCCAAGGGTTGTCAGCAATGGCAATGGCACTCCATCTAGAGAAAAAGAAAAGCAGATAGAAACTGATCAAGAGAATAATAATGGCCTTGTTATTGGCCTGTCCACAGGAGAGACACAAGTGAATTTGGCTCAAGTTATTACCGACTATGTGGAGACACTAGAACTCCGCAAACTACGCTTTTTGGCAGGGTACCCCACTAATGAGGACATCAGCTATGAGGCGTTGGCGCCGTTGCTTCATTTTCACCTAAACAATGCAGGTGATCCATTTGTAGGAAGCAGCTTCTCTCTAAATTCAACTGAATTTGAGGTGTGCGTGCTTGATTGGTTCTCAAAGCTGTGGGAGATAGAGAAGGGTCACTACTGGGGATACGTCACAACTGGTGGAACTGAGGGCAATCTTCACGGAATTTTAATAGGGAGAGAACAATTTCCGGATGGGATTCTATATGCCTCACAAGATTCGCATTATTCAATATTCAAAACAGCAAGAATGTATCGAATGGAATGTTTGAAGGTTGGCTCTTTGGTCTCTGGTGAGATTGATTGTGCTCATCTAAAGGCTTTACTACTTGCTCACAAGGACAAGCCCGCCATCATCAATCTTAACATAGGGACAACAATGAAAGGAGCTGTTGATGACCTTGATCTTGTAATACAAACACTTGTGGAAAGTGGGTTCTCTCGTGATCGATTCTACATTCACTGTGACGGAGCTCTATTTGGAATCATGATTCCTTTTGTCAAAGAAGCACCAAGGATAACTTTCAAGAAACCCATTGGAAGCATTACCATTTCTGGGCATAAGTTCTTAGGATGCCCAATTCCTTGCGGTGTTGTGATAACTCGTTTAGAATACATCAACGCCCTATCTAGAGATGTTGAATACATTGCTTCAAGGGACGCCACAATCACAGGTAGCCGTAGTGGGCATGCTCCAATCTTCCTCTGGTATGCTTTGCAAAGGAGGGGCTTAATAGGACTAGAGAAAGAGGTGCACAAATGCATAATGAATGCACGTTACTTACTGAATCAACTTCGTGATGCTGGCATTGGTGCAATGTTGAATGAGTTCAGCTGCACGGTAGTGTTTGAGAGGCCTCTAGATGATGAGTTTGGCAGTAGGTGGAGTCTGGCTTCCAATGAAAATGTTGCTCACGTGGTTGTGATGCAGCACGTGACCATTGAGATGCTGGACTCCTTTGTTGGTGAATTCCTCCAAAAGCGATCCATTTGGTTCCGAGATGGACACAGGAAGCCCTTGTGCATTGCAGGCGACATTGGAGCAGTAAATTGTAATTGTGCACTGCATAATTTACTGCCTCCAGGAAAATGA 1392 0.4425 MEKNIAVTSIPAAHATDQLPRVVSNGNGTPSREKEKQIETDQENNNGLVIGLSTGETQVNLAQVITDYVETLELRKLRFLAGYPTNEDISYEALAPLLHFHLNNAGDPFVGSSFSLNSTEFEVCVLDWFSKLWEIEKGHYWGYVTTGGTEGNLHGILIGREQFPDGILYASQDSHYSIFKTARMYRMECLKVGSLVSGEIDCAHLKALLLAHKDKPAIINLNIGTTMKGAVDDLDLVIQTLVESGFSRDRFYIHCDGALFGIMIPFVKEAPRITFKKPIGSITISGHKFLGCPIPCGVVITRLEYINALSRDVEYIASRDATITGSRSGHAPIFLWYALQRRGLIGLEKEVHKCIMNARYLLNQLRDAGIGAMLNEFSCTVVFERPLDDEFGSRWSLASNENVAHVVVMQHVTIEMLDSFVGEFLQKRSIWFRDGHRKPLCIAGDIGAVNCNCALHNLLPPGK* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0876 463 Pfam Pyridoxal-dependent decarboxylase conserved domain 117 382 IPR002129 GO:0016830|GO:0019752|GO:0030170
Dod06g0876 463 PANTHER - 53 456 - -
Dod06g0876 463 Gene3D Aspartate Aminotransferase, domain 1 341 428 IPR015422 GO:0003824
Dod06g0876 463 MobiDBLite consensus disorder prediction 20 41 - -
Dod06g0876 463 PANTHER SERINE DECARBOXYLASE 53 456 - -
Dod06g0876 463 SUPERFAMILY PLP-dependent transferases 81 424 IPR015424 -
Dod06g0876 463 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 281 302 IPR021115 GO:0016831
Dod06g0876 463 Gene3D - 98 340 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0876 Dod-Chr6 11069005 11072540 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0876 223 357 Calmodulin-binding Proteins AT1G65960 27.778 4.28e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0876 K25193 - gmx:100781665 668.692