Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0847 ATGGCAGACCAGCCACCAAAAACTTACAGACTCACAGCTACATCAATCTCCTACACCAAATCAACAACCAACAACAGCATCATTGCACCATTCTTCCTCTTCAAGCACTGCACAACGACCCCACCTAATTATATCCTCAAAGAAGTATCTCTAACTGCTTACCCCTCTGAGATCCTAGCCATTGTTGGTCCAAGTGGTGCTGGAAAATCAACCCTTCTAGACATTCTATCTGCTAGAACATTGCCATCACATGGCACTCTTTCGCTCAACTCTTCCCCTCTCATTCCCTCCACATTCCGCAAACTCTCTACATATGTTCCACAGCACGATGCATGCCTCCCTTTGCTCACTGTCTCTGAGACATTTGCCTTTGCAGCTCGCCTTCTCAAGCCTAAGACATGTGATATTGCTGCCATAGTTTCATCTCTTCTCACTGAACTGAGGCTAATACATTTGGCCAACACAAGGCTCTCTCATGGCCTATCAGGTGGAGAACACAGAAGGGTCTCAATTGGCCTTAGTCTTCTTCATGATCCTGCAGTGTTGCTCCTTGATGAACCCACTTCTGGACTTGACAGCACTTCTGCCTTCAAAGTCATGCAAATTCTGAAATCTATTTGTGTTTCTCGGCATAGGACAATTGTCCTGTCCATTCACCAACCAAGCTTTAAGATCCTCTCTTGCATTGATAGGATCTTGTTGCTGTCAAAGGGTACTGTGGTCCACCATGGAAGCCTTGCTTCACTCCAAGCATTCTTGCACTCAAATGGGTTCGCTGTACCCCATCAGCTCAATGCCTTGGAATATGCCATGGAGATACTAAGCCAATTGAATGAGCTTAAGCCTATTACTCCACCAAGCATTCCTGAATCACCAGAAAGTTCAACAAGCTCTATATCTGACAGTGGAACTAGTGCTAAAGAAATCAGGTACAAGAGCTCTAGGATCCATGAAATCATCACACTCTATGGCAGGTTTTGGAAGATCATTTACAGAACTAGGCAGCTTCTTTTGACAAACACTGCTGAAGCACTTCTTGTTGGGCTTGTTTTAGGAACCATTTACATCAACATTGGGTTTGATAAGGAAGGCATTGAGAAAAGGTTTGGTCTCTTTGCCTTCACTCTCACATTCCTACTATCCTCCACAACAGAAACCCTTCCAATCTTCATCAATGAGAGGCCAATCTTGCTGAGAGAAACCTCAAGTGGGGTTTATAGGCTATCATCTTACATGATTGCAAACACACTTGTTTTCTTGCCATACTTGCTGGTAGTTGCTGTTATATACTCCATCCCAGTCTACTTCTTAGTGGGTTTATGTGCTTCTTGGATATCTTTTGTTTATTTTGTTTTGGTCATATGGGTCATAGTTCTCATGGCCAATTCATTTGTCCTCTTCTTGAGTTCCCTTGCACCAAACTACATTGCTGGAACTTCACTATTGACAGTGCTTCTTGCAGCATTTTTCTTGTTCTCTGGCTATTTTATCTCCAAGGATAGCCTACCAAAATACTGGCTCTTTATGTACTTCTTCTCTATGTACAAATATGCTCTTGATGCACTTCTTATCAATGAGTATTCTTGCTTAGTTACAAGGTGCTTCATATGGTACCAAGAGAATCAGCAGTGCATGGTCACCGGAGGGGACGTGCTTCAAAAGAAAGGTCTACAAGAGAGTGAAAGATGGACCAATGTGTACTTCTTGATTGGTTTCTTTGTTTTGTATCGTGTACTTTGCTTATTGGTTTTAATTAGAAGGGTTTCAAGAACCAAAACTTGA 1782 0.4259 MADQPPKTYRLTATSISYTKSTTNNSIIAPFFLFKHCTTTPPNYILKEVSLTAYPSEILAIVGPSGAGKSTLLDILSARTLPSHGTLSLNSSPLIPSTFRKLSTYVPQHDACLPLLTVSETFAFAARLLKPKTCDIAAIVSSLLTELRLIHLANTRLSHGLSGGEHRRVSIGLSLLHDPAVLLLDEPTSGLDSTSAFKVMQILKSICVSRHRTIVLSIHQPSFKILSCIDRILLLSKGTVVHHGSLASLQAFLHSNGFAVPHQLNALEYAMEILSQLNELKPITPPSIPESPESSTSSISDSGTSAKEIRYKSSRIHEIITLYGRFWKIIYRTRQLLLTNTAEALLVGLVLGTIYINIGFDKEGIEKRFGLFAFTLTFLLSSTTETLPIFINERPILLRETSSGVYRLSSYMIANTLVFLPYLLVVAVIYSIPVYFLVGLCASWISFVYFVLVIWVIVLMANSFVLFLSSLAPNYIAGTSLLTVLLAAFFLFSGYFISKDSLPKYWLFMYFFSMYKYALDALLINEYSCLVTRCFIWYQENQQCMVTGGDVLQKKGLQESERWTNVYFLIGFFVLYRVLCLLVLIRRVSRTKT* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0847 593 PANTHER ABC TRANSPORTER G FAMILY MEMBER 8 4 588 - -
Dod06g0847 593 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 4 588 - -
Dod06g0847 593 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 28 262 IPR003439 GO:0005524
Dod06g0847 593 Pfam ABC-2 type transporter 219 279 IPR043926 GO:0140359
Dod06g0847 593 Pfam ABC-2 type transporter 318 527 IPR013525 GO:0016020|GO:0140359
Dod06g0847 593 Pfam ABC transporter 46 189 IPR003439 GO:0005524
Dod06g0847 593 Gene3D - 34 257 IPR027417 -
Dod06g0847 593 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 41 252 IPR027417 -
Dod06g0847 593 SMART AAA_5 55 239 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0847 Dod-Chr6 10530833 10532920 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0847 39 256 Calmodulin-binding Proteins AT2G36910 27.083 1.69e-15 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0847 K05681 - gmx:100790712 911.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0847 06 10530833 10532920 Dod06g0847 06 10530833 10532920 ECH