Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0843 ATGGCTGAGGAATGGGATCTCTCTGCCATTGTGAGAAGTTGCCAATCAGCCACCACTACTGCCACCACTGAAATTCCACTCATCACCACCACCACAACCAATACTATACTATCATTATCACCCCAAAACACTAGTGCTTCCTTGGCCACTCGTACTAGTAGCACTGTGAAGGAAGAAGAATATGACGCGTTTTCTTTTCCCAATGATCTTTTGCAACCTATAACCAATGAGTTTCAAGAGCTAGACCAATTGCTCAGACCCTTTAACCCCACCACCAACACCACTACCACTAGTGGTGGTATTGGCATCAATTCCAATTCCCTTGATCTTGCTGGATGCATTGAGAGGCAGCAACTCGAACATCTTCTTCCCCTTGCCGCGCCTCTCGCTGACCCCTCCTCTATTTGGCCCCATCATCTTGTGCCTGAAGCCTCCACTTCTGGAATCACCAGATTCCATGACCAACACCAATCACAACAACAGGATCAACTACAACTAGTTCACAGTAAACAGGAATCTCAAGTATCCCAAAGCAGTTCCAGCACAGCTTTGCCAGACGCGCTACAACCTCAAACACCCAGATCAAGAAAAATAAGAAAAAATCAACAAAACAGAATGGTGTGCCATGTAACCGCGGATAACCTCTCAGCAGATATGTGGGCATGGCGTAAATATGGACAAAAACCAATCAAAGGATCTCCATTCCCAAGAAACTACTACAGATGTAGCAGCTCGAAAGGTTGTTGTGCACGGAAGCAAGTTGAACGAAGCAATGAAGAAGCCAACATGTTCATCATCACGTACACGGGAGACCACAATCATCCGAGGCCCACCCACCGGAACTCCCTCGCCGGAAGCACACGGAGCAAGCCCTCAACGCCGGCCAACCAAAACCAAAACACTACTGCCGCAATGGTTGTTGCAGCACCTTCAGCACACTCCCCAGATCATCAGGTGAAAGAGGAGATGGATCCCGAAAGCCCTGACCCGGATACAGAAACCGAAGTGGACCCCGATGGTGACACTGACTGGACCGGCTTCAATCCCGGCTGA 1053 0.4881 MAEEWDLSAIVRSCQSATTTATTEIPLITTTTTNTILSLSPQNTSASLATRTSSTVKEEEYDAFSFPNDLLQPITNEFQELDQLLRPFNPTTNTTTTSGGIGINSNSLDLAGCIERQQLEHLLPLAAPLADPSSIWPHHLVPEASTSGITRFHDQHQSQQQDQLQLVHSKQESQVSQSSSSTALPDALQPQTPRSRKIRKNQQNRMVCHVTADNLSADMWAWRKYGQKPIKGSPFPRNYYRCSSSKGCCARKQVERSNEEANMFIITYTGDHNHPRPTHRNSLAGSTRSKPSTPANQNQNTTAAMVVAAPSAHSPDHQVKEEMDPESPDPDTETEVDPDGDTDWTGFNPG* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0843 350 Gene3D WRKY domain 200 270 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod06g0843 350 SUPERFAMILY WRKY DNA-binding domain 211 277 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod06g0843 350 MobiDBLite consensus disorder prediction 279 307 - -
Dod06g0843 350 MobiDBLite consensus disorder prediction 326 340 - -
Dod06g0843 350 MobiDBLite consensus disorder prediction 152 205 - -
Dod06g0843 350 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 3 330 IPR044810 GO:0003700
Dod06g0843 350 SMART WRKY_cls 216 276 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod06g0843 350 MobiDBLite consensus disorder prediction 269 350 - -
Dod06g0843 350 ProSiteProfiles WRKY domain profile. 211 277 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod06g0843 350 MobiDBLite consensus disorder prediction 152 197 - -
Dod06g0843 350 PANTHER WRKY TRANSCRIPTION FACTOR 27-RELATED 3 330 - -
Dod06g0843 350 Pfam WRKY DNA -binding domain 218 275 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0843 Dod-Chr6 10484509 10486246 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0843 194 346 WRKY Transcription Factor Family AT5G52830 60.645 7.07e-55 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod06g0843 WRKY 1.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0843 K13425 - aprc:113871802 302.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g2973 02 63303953 63305740 Dod06g0843 06 10484509 10486246 PCT