Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0811 ATGCCAGTTCCAAGACTCACAGCCTCTGGCACTCCTGATGTCATGAAAACAGAAGACAGGAATGATTTAGATACCATCATCAGACAAGCAGTCGGAAAGGAACCTTTCCTTTCTTTTCCTAGGGCTGGTGACAGCCCTGTACAGTGGATTCAATTACTCCATGCTTTAGATCAGAATGAACTTCCAGGGTGGCCTTTGCTCTCTCCTGTGAAGGTTCAGATGCAGAAGTGTGACAAGTGTTCTCGAGAGTTTTGCTCTCCCATTAACTATAGAAGACATATGCGTGTACACCATCGATTGAAAAAGCTTGATAAGGATTCTAAAAAGAACAGGGATCTTTTAGGAGCTTATTGGGATAAGCTCTCTGTAGAAGAGGCAAAGAAAGTTGTGTCATTCGAGAATGTGATGCTGGAGGAAGTTCCAGGGTCTTCAATTTCGAAATCTCTTGCAACTCTTACTCAAAAACAAGGATTTTCTTCTCTTCCACAGTATTATCTGAGGGCTGGTTCTGCCCTTTTGGATATTGTTGAATCTAGGCCATCCAGTTTTCCTATATCATCCCAACAGTTGTTCAGTATACTAGATGATTCCAGTGAAAGAACATTTTTATGTGGAACAGCGGTGTCAATGCAAAGATACGTTTTTGATGGAGAGGCTGGAAAGATTGGTCTTGAACCGAAAAACCTAGTTGCTTGCACAAGTTTCTTGCTAGAGCAGAAATTGGTGAAGGCATGGCTTGCTGACAAGGAAGCAGAAGCATTGAAGTGCCTGAAGCAGCTGGTGGAGGAGGAAGAAGCTGCTCAGAAAAGACAAGCTGAAATTTTGGAGAGGAAACGCCAGAAAAAGCTTAGACAAAAAGAACTGAAAGTCAGGGAACGACTTGAAGATGACACAGAAACTAAAGGGAACATCAGCAGCACAGTAGAGGCCATATCATCTGCAGAAGCATCTTTGGATGCCTGTGGCTTTGAAGCACAAAATTCAGATACATTTGCAGATTATGCTCCTTTAGCACATGGAACCTGTCACTACCCAGACTTTAATGAAGGTGTTGATGGCGGTACACAATATTGTGACACTGATCAGAATATTGACCGGCAGACATCACAAGGACATAATCGCCGGCGAATGATGGTTGCTAGACGTCAAGGGCTGCCAAAATCACAATGGGCTGCTGTATCCAATGGTTTCCATGCGAGTGCAAATTCTCAAATGTCAAAGCTTGGAGCCATTGAGAAATTTGGGACCAACCGTGATCAAAGAGCAGCTCCTATTGTAAACAGCACTAAAGTGTGGAGTCGAAAGCCCAAACCAGAAGTTGTTGGGGTGGTTTCAAAAGCGGGACTGCTAAAGGAAGCGGACAAAGGTAAGAATTATGAAGTTTTGATAGGATCTATATCCGTTACTCTAGGCAATTGCAGCCAAATCCAATCAGAGGGTAATATGGTAGCATCTCAAGGGAATTGCATCGTGGAGAATCCGGCCAAGCAAAATACTGCTCAGGAAAGGCCAGTGAAACCTGATTCCTTCCAGAGTGGCAGTAATCGCTTAACAGTTAAGCTTTGGAGGCCAGTTGGCCAGCATGGAACTAAAGATCCATTGCCACCTCAAAGTGGTGGAACTGAAGCTGATGCTGTTAATGGGAAAGATGATCAAAATTTGTCAGGTCCAGGAAGCTTGGGGTTGTCCTGCCATGCTGCTAAAGCCTTTCTTGCACGAAGATGGAAAGAAGCTATCTCATCAAACCATTTGAAATTGGTTGTTTCACCTGATTCTGAGCCTCCTGGATGCCAGGAGGTACAAGATTGTGAAGTGGAAGCATGTCAATCTACTAATGTTGATAGATGTAGCATTCCTGCAAATGCAGAGAACCGGTTGCATATGACCTCCGGAGTTACTAAATCCAAAACCAAAATGAACCCGAAAAAGGGAATCAAGATAAAGTATATTCCCAAACAAAAAGCAGCTACCTAG 1974 0.4357 MPVPRLTASGTPDVMKTEDRNDLDTIIRQAVGKEPFLSFPRAGDSPVQWIQLLHALDQNELPGWPLLSPVKVQMQKCDKCSREFCSPINYRRHMRVHHRLKKLDKDSKKNRDLLGAYWDKLSVEEAKKVVSFENVMLEEVPGSSISKSLATLTQKQGFSSLPQYYLRAGSALLDIVESRPSSFPISSQQLFSILDDSSERTFLCGTAVSMQRYVFDGEAGKIGLEPKNLVACTSFLLEQKLVKAWLADKEAEALKCLKQLVEEEEAAQKRQAEILERKRQKKLRQKELKVRERLEDDTETKGNISSTVEAISSAEASLDACGFEAQNSDTFADYAPLAHGTCHYPDFNEGVDGGTQYCDTDQNIDRQTSQGHNRRRMMVARRQGLPKSQWAAVSNGFHASANSQMSKLGAIEKFGTNRDQRAAPIVNSTKVWSRKPKPEVVGVVSKAGLLKEADKGKNYEVLIGSISVTLGNCSQIQSEGNMVASQGNCIVENPAKQNTAQERPVKPDSFQSGSNRLTVKLWRPVGQHGTKDPLPPQSGGTEADAVNGKDDQNLSGPGSLGLSCHAAKAFLARRWKEAISSNHLKLVVSPDSEPPGCQEVQDCEVEACQSTNVDRCSIPANAENRLHMTSGVTKSKTKMNPKKGIKIKYIPKQKAAT* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0811 657 SMART c2h2final6 75 97 IPR013087 -
Dod06g0811 657 Coils Coil 247 285 - -
Dod06g0811 657 MobiDBLite consensus disorder prediction 494 554 - -
Dod06g0811 657 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 556 655 - -
Dod06g0811 657 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 545 - -
Dod06g0811 657 ProSitePatterns Zinc finger C2H2 type domain signature. 77 98 IPR013087 -
Dod06g0811 657 MobiDBLite consensus disorder prediction 494 518 - -
Dod06g0811 657 ProSiteProfiles Zinc finger C2H2 type domain profile. 75 102 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0811 Dod-Chr6 10115607 10121967 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0811 13 654 C2H2 Transcription Factor Family AT4G25610 43.093 6.71e-155 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Dod06g0811 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0811 - - gmx:100799153 896.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0811 06 10115607 10121967 Dod06g0811 06 10115607 10121967 ECH
Dod02g3019 02 63778808 63789169 Dod06g0811 06 10115607 10121967 PCT