Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0810 ATGGGTAGTATCCAAATCCAAGTAGCAGCAGCAGAAGAAGAACAAGACCGAGTTCATGAGGAAGACAGAGACACAGACACAGAGACAGTGTATGTTGCTGTGGGGAAGAACATCGATAAGACCAAACAACTGTTGCATTGGGCATCTCACAATTTCCCATCCAAACCGATTTGCGTCCTTCATGTTCACCAACCCAAGACCCCCAATCACTTAAACAGAAACCTTTCTCGGGTTGAACCGAGAAGTCATGCAATCAATGCATACCAGGATGATGGAAGTAAAAAAGTGCATGAACTCCTAGACCAATATGTTGCCACCCTTGTCCTAGCAGGGGTACAGGCCTATAAATTGTTGATTGAGATGGACAATATTGAGAAAGGGATCGTGGAAGCTATTGCTCAACACAATATTAGATGGCTTGTGATTGGAGCTGCTGCAGATAGATATAACTTGGGTTGGAATTGCAGTGAACTGGCCGAGCAAGAGTCAGAGAAAAGTGTCCTTGTACGTAAACAAGCATACCCATCCTGTAATATTTGGTTCCTTTGCAAAGGCAACATCATATTTACCAGGATAGATAGTAAACATACATCTGAAATAGAGACTGTCCCTCCATTGTTGGTGCTCAATTCAGATACAGAAGCTGAACAATCAGAGAAGTCCAAACCTGAATCAACTCCCAATGCATTGAGATATTTAGGTTCTGACAATATGGAAGAAATTGAAAATTTCAGTTCAGACTGCCCGTTACATTCAAAATGGTCCCGCAATAGTGTTGACAGTTCAAAGTTGACAGATTTTCTGTTCCATGAGGAGGAGGAAGATGGAAGGAAAGAAGCAAGCGAAAAAAATGTTAGACTGGAAAAAACCATAGGAGATTCTAAGAGCGTGAAACGAAAAGAATTTGCGGAGGCATTAAAGCAATGGAAAGTTGAAAAAAGTACTTTGGAGGATGAAGCATTAGAGAGCTGGTGTGCTAAGGAGATAAATAGAAGAAAAGAAGTTGAAGAACAATTGGCTAGTGAAAAGGAAGAAGTACAGAAAATAAAGAATCAGCAAGATGAAATAATGCATGAATTGCAAACTGTACAAGACCAAAATTCAGCACTCAAGAACCAACTTTTCGAATCTCAGTGTATGGTGACCGAGTTGGAGGAGAAGATCATATCAGCTGTGGACCTCTTGATAAGTTTCAGAGAAAAACGAGATAAGCTAAGGATAGATCATGCAAATGCAGTGAGGCAAGTCAAAGTGCTGAAGGAATTTGGAGCACATACTGCATTCTCTTATTCGGTAGAATTTCCTGTATTCTCTTTCGTGGAGATCAATGAGGCAACTAATGATTTTGACCCATCTTGGAAGATTGGAGAGGGAAGGTATGGAAGCGTTTACAAAGGAGTGCTTCGCAACATGCATGTTGCCATAAAAATGTTACCCTCTTATGGCTGTCAGAGCCAATGGGAGTTTGAACATCAGGTAGAGGTTTTGAGTAGGGTAAGGCATAGAAACCTGTTAACACTGATTGGAAGCTGTGCAGAGTCTAGGTCACTTGTCTATGAGTATGTAAACAATGGTAGCCTTGAACGCCACCTTGCCTGCAAAGACAAGACTCCCCTTCCATGGCAAATTCGAATCTCCATTGCTGCTGACATATGCTCCACTCTAATATTCCTTCACTCTAGTGAGCCTTGTATTATCCATGGGAATTTGAAACCTAGTAAGATTCTCCTTGATGCTAACTTTGTTGCCAAACTTGCTGACGTGGGAATTCCTGGTTTAGTCCAGCATAGGGTGGATTCAACTGACACAACCACAGTACATAACAAGAACCAAAATCAAAGTTTGACTTATGTAGATCCAGAATATCTTGTCACTGGAAAGTTCACAGCAGAATCAGATGTGTATTCATTCGGAATCATATTGTTACAACTTCTAACTGGAAGACCAATTCTGGGGCTAGTTAGAGATGTGAAATGTGCATTGGAAAAGGAAAACCTCAAAGCAGTATTGGACTATTCAGCTGGTGAATGGCCACTTTATCAGACTAGACAGCTCGCATACATAGCATTGAGGTGTTGTGAAAGGACTTGGCTGAACCGGCCAGACCCTGGGTCAGAAATCTGGAGTGTTCTTGAACCATTCCGAACTATGTGCATCAACATGCCACGATCTTTGACTTCTAAGAAACATCGCCGCACCCCATCCCATTTTGTATGCCCCATTTTGCAGGAAGTAATGGAAGATCCATACATAGCTGCAGATGGCTTTACATATGAAGCAGAGGCAATCAAAGAATGGTTGGATAGTGGTCACAACACTTCCCCCATGACAAACCTCCAGCTTGAACACACAAATTTAGTTCCTAATTATGCGCTACATAATGCAATTCAGGAGTGGCAGCAACTACAATGA 2412 0.4171 MGSIQIQVAAAEEEQDRVHEEDRDTDTETVYVAVGKNIDKTKQLLHWASHNFPSKPICVLHVHQPKTPNHLNRNLSRVEPRSHAINAYQDDGSKKVHELLDQYVATLVLAGVQAYKLLIEMDNIEKGIVEAIAQHNIRWLVIGAAADRYNLGWNCSELAEQESEKSVLVRKQAYPSCNIWFLCKGNIIFTRIDSKHTSEIETVPPLLVLNSDTEAEQSEKSKPESTPNALRYLGSDNMEEIENFSSDCPLHSKWSRNSVDSSKLTDFLFHEEEEDGRKEASEKNVRLEKTIGDSKSVKRKEFAEALKQWKVEKSTLEDEALESWCAKEINRRKEVEEQLASEKEEVQKIKNQQDEIMHELQTVQDQNSALKNQLFESQCMVTELEEKIISAVDLLISFREKRDKLRIDHANAVRQVKVLKEFGAHTAFSYSVEFPVFSFVEINEATNDFDPSWKIGEGRYGSVYKGVLRNMHVAIKMLPSYGCQSQWEFEHQVEVLSRVRHRNLLTLIGSCAESRSLVYEYVNNGSLERHLACKDKTPLPWQIRISIAADICSTLIFLHSSEPCIIHGNLKPSKILLDANFVAKLADVGIPGLVQHRVDSTDTTTVHNKNQNQSLTYVDPEYLVTGKFTAESDVYSFGIILLQLLTGRPILGLVRDVKCALEKENLKAVLDYSAGEWPLYQTRQLAYIALRCCERTWLNRPDPGSEIWSVLEPFRTMCINMPRSLTSKKHRRTPSHFVCPILQEVMEDPYIAADGFTYEAEAIKEWLDSGHNTSPMTNLQLEHTNLVPNYALHNAIQEWQQLQ* 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0810 803 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 32 24 802 - -
Dod06g0810 803 SMART Ubox_2 736 799 IPR003613 GO:0004842|GO:0016567
Dod06g0810 803 CDD RING-Ubox_WDSUB1_like 737 778 - -
Dod06g0810 803 ProSiteProfiles Protein kinase domain profile. 449 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0810 803 CDD STK_N 29 185 - -
Dod06g0810 803 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 41 145 - -
Dod06g0810 803 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 732 803 IPR013083 -
Dod06g0810 803 Gene3D Transferase(Phosphotransferase) domain 1 522 717 - -
Dod06g0810 803 SUPERFAMILY RING/U-box 731 800 - -
Dod06g0810 803 Coils Coil 325 373 - -
Dod06g0810 803 Gene3D HUPs 24 145 IPR014729 -
Dod06g0810 803 Coils Coil 270 290 - -
Dod06g0810 803 Gene3D Phosphorylase Kinase; domain 1 424 521 - -
Dod06g0810 803 Coils Coil 299 319 - -
Dod06g0810 803 ProSitePatterns Protein kinases ATP-binding region signature. 455 476 IPR017441 GO:0005524
Dod06g0810 803 Pfam Protein tyrosine and serine/threonine kinase 454 701 IPR001245 GO:0004672|GO:0006468
Dod06g0810 803 ProSiteProfiles U-box domain profile. 732 803 IPR003613 GO:0004842|GO:0016567
Dod06g0810 803 SUPERFAMILY Protein kinase-like (PK-like) 428 711 IPR011009 -
Dod06g0810 803 PANTHER OS02G0152300 PROTEIN 24 802 - -
Dod06g0810 803 Pfam U-box domain 734 800 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0810 Dod-Chr6 10107281 10114143 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0810 81 800 U-box Gene Family AT3G49060 46.509 0.0 615
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Dod06g0810 PK_Tyr_Ser-Thr 3e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0810 - - aprc:113871315 1086.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0810 06 10107281 10114143 Dod06g0810 06 10107281 10114143 ECH