Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0788 ATGGTGAGCCAGAGGCAGCGACTTGCACGGAAGCAATTCAGAGCAGAGCACCCTGAGCTCTTCCCGAAGCCAGAACCCACGCCTCCCAAGGACCCTGACAAGAAGAAGAAGAAGAAGTATAAGAAGGGCTCGTTAAAGCGCAAAAACGGTGACCCCAATGAACTCGGCGTTGCCAAAGAGCCCTTCAAGAAGAGCAGTTTCCGAAAACACCCTCTTAGAGTCCCTGGCATGAAGCCCGGTGACACCTGTTTCATCTGCAAGGCCATGGACCATATCGCCAAGTCATGCCCTCAAAAAGCTGAATGGGAAAAAAATAAGATATGCTTGAGGTGTCGACGGCGTGGACATAGAGCCAAGAATTGCCCTGAGTTGCAAGATGGCAACAAGGATGAGAAGTATTGCTATAATTGTGGGGAAAGTGGCCATTCACTTGCAAAATGTCCGCAGCCTCTTCAAGAAGGAGGGACAAAGTTTGCTGAGTGCTTTGTCTGTAATCAACGTGGACACTTGAGTAGAAACTGCCCTCAAAATGCTCATGGCATTTATCCAAAGGGTGGATGTTGTAAAATATGTGGTGGTGTGACACATTTGGCGAAGGATTGTCCTGACAAAGGGATGAAAGGATCTGCTGCTGCTAATGGACCCGCTGAGAGATTGAGAACTGAAGTGAGGGCAAGTGGTCAGGTTACCAAATTTGTGAGTGGGGATGATATTGAGGATGACTTCATGAGAGATGACTTGCATGGCGACGACAAGAACAAGTCCTCAAAATCAAAAGATAGCCATGTAAAACCAAGGAAGAAGGGTCCTAAAGTTGTGAACTTCAGCTAA 831 0.4753 MVSQRQRLARKQFRAEHPELFPKPEPTPPKDPDKKKKKKYKKGSLKRKNGDPNELGVAKEPFKKSSFRKHPLRVPGMKPGDTCFICKAMDHIAKSCPQKAEWEKNKICLRCRRRGHRAKNCPELQDGNKDEKYCYNCGESGHSLAKCPQPLQEGGTKFAECFVCNQRGHLSRNCPQNAHGIYPKGGCCKICGGVTHLAKDCPDKGMKGSAAANGPAERLRTEVRASGQVTKFVSGDDIEDDFMRDDLHGDDKNKSSKSKDSHVKPRKKGPKVVNFS* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0788 276 MobiDBLite consensus disorder prediction 1 72 - -
Dod06g0788 276 ProSiteProfiles Zinc finger CCHC-type profile. 134 149 IPR001878 GO:0003676|GO:0008270
Dod06g0788 276 SMART c2hcfinal6 160 176 IPR001878 GO:0003676|GO:0008270
Dod06g0788 276 SMART c2hcfinal6 107 123 IPR001878 GO:0003676|GO:0008270
Dod06g0788 276 SMART c2hcfinal6 82 98 IPR001878 GO:0003676|GO:0008270
Dod06g0788 276 SMART c2hcfinal6 133 149 IPR001878 GO:0003676|GO:0008270
Dod06g0788 276 SMART c2hcfinal6 187 203 IPR001878 GO:0003676|GO:0008270
Dod06g0788 276 MobiDBLite consensus disorder prediction 9 33 - -
Dod06g0788 276 MobiDBLite consensus disorder prediction 240 258 - -
Dod06g0788 276 ProSiteProfiles Zinc finger CCHC-type profile. 161 176 IPR001878 GO:0003676|GO:0008270
Dod06g0788 276 PANTHER OS04G0555800 PROTEIN 1 275 - -
Dod06g0788 276 Pfam Zinc knuckle 187 202 IPR025836 -
Dod06g0788 276 Pfam Zinc knuckle 106 122 IPR025836 -
Dod06g0788 276 Gene3D - 128 181 - -
Dod06g0788 276 SUPERFAMILY Retrovirus zinc finger-like domains 76 124 IPR036875 GO:0003676|GO:0008270
Dod06g0788 276 Gene3D - 75 127 - -
Dod06g0788 276 MobiDBLite consensus disorder prediction 46 67 - -
Dod06g0788 276 Pfam Zinc knuckle 161 176 IPR001878 GO:0003676|GO:0008270
Dod06g0788 276 Pfam Zinc knuckle 82 98 IPR001878 GO:0003676|GO:0008270
Dod06g0788 276 Pfam Zinc knuckle 133 149 IPR001878 GO:0003676|GO:0008270
Dod06g0788 276 MobiDBLite consensus disorder prediction 240 276 - -
Dod06g0788 276 ProSiteProfiles Zinc finger CCHC-type profile. 108 123 IPR001878 GO:0003676|GO:0008270
Dod06g0788 276 SUPERFAMILY Retrovirus zinc finger-like domains 127 178 IPR036875 GO:0003676|GO:0008270
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0788 108 209 C2H2 Transcription Factor Family AT5G20220 31.667 3.00e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0788 - - aip:107616096 421.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0788 06 9645156 9648189 Dod06g0788 06 9645156 9648189 ECH