Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0771 ATGGGAAAAGCACCGTGCTGTGACAAGCATGGAGTGAAGAGGGGAGCTTGGACCCCTGAAGAAGATGAAGCTTTAGTTGAGTATATCAAGAAGCATGGCCATGGAAGTTGGCGCACACTCCCCAAGCATGCAGGTCTCCTACGATGTGGTAAGAGTTGTAGGCTGCGGTGGATAAATTATCTACGCCCTGACATCAAGCGCGGCCCATTTACTGCTGAAGAAGAAAGTACTATTATTCAACTTCACGGCATGCTTGGCAACAGGTGGGCTGCTATAGCATCCCAACTTCCTGGAAGAACAGACAATGAGATAAAGAACTATTGGAACACTCATCTAAAGAAGCGCCTCCTTCCATCTGGCCATTCCGGAGGGACTAAACAGCCACCTCTCCGCCCTGATCCGAGGATCTTCAAGTCTGAATCTCCTTCAACTCGACACATGGTACAATGGGAAAGTGCTAGAGTTGAGGCAGAGGCAAGGTTGTCGATGGAATCCTCATTGCTTAACTCATGGCCACCGGGTAAAACATGCCCTGATTACTTTATTAGACTTTGGAATTCTGAGGTTGGACAGTCATTTCGTGTGATCAAGGGAAAGGAAAGAATGGAGTGTCAAAGCCTTGTCTCACAGGCATCAACACCATCATCATCAAAGTTGGAGTCATGTTCAGATGTCTCATTGCAGGTGAAAAACAGTGGGGCCAGTAGTACCTCTCCCAACATTGTTCAAGAACAAGCAAGTAGCTACAAACCAAAGCTTGAAGATGACACGGGTGGGTCAGACTCAGGCAATTATGAATTCCTTGATACTTCTGATTCTTCATTGAAGCACCTGCTGGGTATGCCTGATGGTGATATAGAATTCTTGGAACAAACTGACAGTTTCCTGAACCGCCTTGGTGGTAGATGTGACTAA 915 0.4667 MGKAPCCDKHGVKRGAWTPEEDEALVEYIKKHGHGSWRTLPKHAGLLRCGKSCRLRWINYLRPDIKRGPFTAEEESTIIQLHGMLGNRWAAIASQLPGRTDNEIKNYWNTHLKKRLLPSGHSGGTKQPPLRPDPRIFKSESPSTRHMVQWESARVEAEARLSMESSLLNSWPPGKTCPDYFIRLWNSEVGQSFRVIKGKERMECQSLVSQASTPSSSKLESCSDVSLQVKNSGASSTSPNIVQEQASSYKPKLEDDTGGSDSGNYEFLDTSDSSLKHLLGMPDGDIEFLEQTDSFLNRLGGRCD* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0771 304 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Dod06g0771 304 CDD SANT 69 112 IPR001005 -
Dod06g0771 304 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Dod06g0771 304 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Dod06g0771 304 CDD SANT 16 61 IPR001005 -
Dod06g0771 304 SMART sant 66 114 IPR001005 -
Dod06g0771 304 SMART sant 13 63 IPR001005 -
Dod06g0771 304 Gene3D - 14 66 - -
Dod06g0771 304 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 293 - -
Dod06g0771 304 PANTHER MYB TRANSCRIPTION FACTOR MIXTA-LIKE PROTEIN 1 293 - -
Dod06g0771 304 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Dod06g0771 304 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Dod06g0771 304 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Dod06g0771 304 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Dod06g0771 304 MobiDBLite consensus disorder prediction 230 267 - -
Dod06g0771 304 Gene3D - 69 116 - -
Dod06g0771 304 MobiDBLite consensus disorder prediction 230 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0771 Dod-Chr6 9362969 9365389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0771 1 295 MYB Transcription Factor Family AT3G61250 55.082 9.57e-101 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dod06g0771 Myb_DNA-binding 1.5e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0771 K09422 - gmx:100807142 486.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3055 02 64764597 64766703 Dod06g0771 06 9362969 9365389 ECH
Dod06g0771 06 9362969 9365389 Dod06g0771 06 9362969 9365389 ECH