Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0769 ATGAGGTGTCAGGCACTAGAAAAGGCAAAACCAAAACACAAGAAGGGCTTATGGTCACCTGAAGAAGACAATAAGCTTAGAAACTACATCCTTAAGCATGGTCATGGCTGCTGGAGCTCTGTCCCTATTAAGGCAGGGTTACAAAGGAATGGAAAAAGTTGCAGACTTAGGTGGATTAACTATCTAAGGCCAGGATTAAAGAGAGGAATGTTCAGCAAACAGGAGGAGGAGACAATCCTCTCCCTTCACCAGATGTTAGGCAACAAGTGGTCTCAGATAGCACAGAATTTGCCAGGAAGGACTGACAATGAGATAAAAAACTACTGGCATTCATATTTGAAAAAGAAAGTGGCCAAAGCTATGGAAATGGAATCTCATAAACAAGTTCAGTATGCTAGCTCAAGCTCAGATACCATGGACTCTTCCCACAGTCTCCAAAACCTTGCACCTCAAGCCCCACAGAATTATAACTTCACCAATGAAGCTTGTCAAAGCTCCTTACCAAAACTGTTATTTGCTGAGTGGCTTTCACTGGATCATTCACATGGTGGCAACTCTGCAAATTCATATGAATCTTTGGCCTTAAGGAATGAATTTGATCAAAACTCAACTTTTCAAGAAGCTGTAATGCATGATATGTCAGAAGGACCCTTTGGTGGAGAGTATTATAATTGTCTAACTCAAAGTTCAGCCACAGAGATGTTCAATTCACAACTTAAGTTTGGAAATCAAATGGAAGGAAATGGATTCATCCATTGCATGCCTGGTGTTGATTTAAGTAACAATTTCAGCCTTAGCAATGATTCAATGTACGTATGA 819 0.4042 MRCQALEKAKPKHKKGLWSPEEDNKLRNYILKHGHGCWSSVPIKAGLQRNGKSCRLRWINYLRPGLKRGMFSKQEEETILSLHQMLGNKWSQIAQNLPGRTDNEIKNYWHSYLKKKVAKAMEMESHKQVQYASSSSDTMDSSHSLQNLAPQAPQNYNFTNEACQSSLPKLLFAEWLSLDHSHGGNSANSYESLALRNEFDQNSTFQEAVMHDMSEGPFGGEYYNCLTQSSATEMFNSQLKFGNQMEGNGFIHCMPGVDLSNNFSLSNDSMYV* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0769 272 CDD SANT 18 62 IPR001005 -
Dod06g0769 272 CDD SANT 71 113 IPR001005 -
Dod06g0769 272 Gene3D - 15 67 - -
Dod06g0769 272 SMART sant 14 64 IPR001005 -
Dod06g0769 272 SMART sant 67 115 IPR001005 -
Dod06g0769 272 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 62 IPR017930 -
Dod06g0769 272 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Dod06g0769 272 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Dod06g0769 272 PANTHER MYB DOMAIN PROTEIN 55 154 265 - -
Dod06g0769 272 Gene3D - 70 142 - -
Dod06g0769 272 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Dod06g0769 272 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
Dod06g0769 272 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Dod06g0769 272 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Dod06g0769 272 PANTHER MYB DOMAIN PROTEIN 55 1 153 - -
Dod06g0769 272 PANTHER MYB TRANSCRIPTION FACTOR 154 265 - -
Dod06g0769 272 PANTHER MYB TRANSCRIPTION FACTOR 1 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0769 Dod-Chr6 9347901 9350842 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0769 8 181 MYB Transcription Factor Family AT3G48920 58.523 1.05e-63 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dod06g0769 Myb_DNA-binding 2e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0769 K09422 - gmx:778167 449.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0769 06 9347901 9350842 Dod06g0769 06 9347901 9350842 ECH