Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0758 ATGGCCATCGTCATCGGCGCCGCCCTCATCGTCTCTTTCCTCCTCTTTGCGGTGTTCTCTGCCTTCCTCCGCCGCTGCGCAGAGTCATACGTCGCCCAACAGGGGAATACAGAGTGGCCCTGTTCCTGCTCAAGGAGTGGCATCAGCCCCGAAATCCTCGAAACCTTCCCAACCCTCGTATACTCCACAATCAAGGACCTTAGAATCCGTAAAGCAGGAGCAGCAGAGGGTCCACTCGAATGCGCCGTGTGCCTCACGGAGTTCAATGACGATGATACCCTGCGGTTGATCCCACATTGCAACCACGTGTTCCACCCTCCCTGCATCGACACGTGGCTCTCTTCCCACGTCACGTGCCCCGTTTGCCGCGCCAATCTCACCCAAGATCCAGGACAAGTCGCAGTTTGGCTAGCCGCAACCGAGTTGTGCGGGGAAGGAAGCGAAGGAGCGGAAGGTTCTGGAAACAGAGCATCGGAACAGAGTATTGGATGTGGCGGTACTGGGAATGAAATTGAAGGGTGCCCGGTGGCGCGTGAGGGGGTGAGGAGCGATGAGGAGGATAAAGGGGTGAGGGAACGTGAGTCAAAATCGAAGCTTTTTGGGAAGAGGAGGGTGCTTCCGAGGTCGAACACGACGGGTCATTCGGTTGTGGAGGCAGGGGAGTGTGTGGAGAGGTTCACGCTGAGGTTGCCGGAGGATGTGAGGAGATACATTATGCTGAACCATGGGGTGCTGATGAAGCGTTCAGCAAGCTACAACGTGGTGGGCAGTACGAGGAGAGGGTTGTGTTGGAGTGACGGTGAAGGGGGTAGCAGCAGAGGTAAGATGGATATGAACATGGTTGGGGTGAGGGGTCTCGGGGGCTCTGTAAGAGGGAAGAGTGTGAAGTGA 891 0.5679 MAIVIGAALIVSFLLFAVFSAFLRRCAESYVAQQGNTEWPCSCSRSGISPEILETFPTLVYSTIKDLRIRKAGAAEGPLECAVCLTEFNDDDTLRLIPHCNHVFHPPCIDTWLSSHVTCPVCRANLTQDPGQVAVWLAATELCGEGSEGAEGSGNRASEQSIGCGGTGNEIEGCPVAREGVRSDEEDKGVRERESKSKLFGKRRVLPRSNTTGHSVVEAGECVERFTLRLPEDVRRYIMLNHGVLMKRSASYNVVGSTRRGLCWSDGEGGSSRGKMDMNMVGVRGLGGSVRGKSVK* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0758 296 SUPERFAMILY RING/U-box 80 132 - -
Dod06g0758 296 MobiDBLite consensus disorder prediction 177 201 - -
Dod06g0758 296 Pfam Ring finger domain 80 123 IPR001841 -
Dod06g0758 296 ProSiteProfiles Zinc finger RING-type profile. 81 123 IPR001841 -
Dod06g0758 296 PANTHER RING-H2 FINGER PROTEIN ATL11 1 250 - -
Dod06g0758 296 CDD RING-H2_PA-TM-RING 80 123 - -
Dod06g0758 296 SMART ring_2 81 122 IPR001841 -
Dod06g0758 296 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 60 131 IPR013083 -
Dod06g0758 296 PANTHER RING FINGER DOMAIN-CONTAINING 1 250 - -
Dod06g0758 296 MobiDBLite consensus disorder prediction 147 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0758 Dod-Chr6 9247323 9248213 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0758 1 261 Rapid Response to Elicitors AT3G05200 39.777 1.57e-49 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0758 K10664 - gmx:100782532 199.519