Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0753 ATGGCTGTGTCGTGCTACAACCTCGTACTCTGCTACCTTCTCACGTTCTGCCCCTTCTGCGCCATTGCAGACAAAACCAACCAAAACCCAGAAAAAATTTCCCTCCTTTCGTTCAAGAATAGCCTCCACAACCCTCACCTGCTCTCCTCATGGCAACCTTCAACTCCGCACTGTGACTGGTTCGGAGTCACGTGTCAACTCGGCCGAGTCACCTCGCTCTCCCTTCCCTCTCACTACCTCAGAGGAACACTCTCTTCATCTCTCTTCTCTCTAACCTCACTCACCGTCCTCGACCTCGAAGAAAATCACTTCTCCGGCGAACTCCCAAGCAAACTCGGCGAGTTGACTCAGTTAGAGACCCTCCGACTCAGTTCCAACTCATTCGCCGGAAAAATCCCGCCGGAGGTGGGGCAGCTGACAAAGCTTCGCACCCTTGACCTCTCCGGCAATGTCCTCGCCGGGGAACTGCCGGAGACCATCGGGAACTTGACGCAGCTTCAGTTCCTTGACCTCAGCAACAACCTTCTCTCAGGTTCTCTGCCTCTGTCTCTGTTCACCGGAACCGTGTCTTTGATTTCCCTTGACATCTCCAACAACTCGTTTTCCGGCGAGTTTCCGCCGGAGATCGGGAACTGGAGGAACATCACTGCGCTCTACGTTGGGATGAACAAGTTGTCTGGTAGGTTGCCTAAGGAAATTGGTGGGCTTTCGAAGCTTGAGATTTTCTATTCACCTTCCTGTTCCATCGAAGGTCCATTGCCTAAGGAAATGGCAAAGCTCAAGTCTTTGGCGAAACTTGACCTTTCCTACAACCCTTTGAGGTGTTCAGTCCCAGAGTTTATTGGGGAGTTGGAGAGCTTGAGAATTTTGGACCTTGTTTTTGCTCAGCTCAATGGGTCAGTTCCACCTCAGCTTGGGAACTGTAGGAACTTGAGGTCTGTGATGGTTTCTTTCAATTCTCTTTCTGGGTCACTCCCTGAGGAGCTTTCTCAGCTTCCTATTGTGACTTTCTCTGCTGAGAAGAATCAGCTTCATGGGCCTTTGCCTTCTTGGTTTGGGAAGTGGACCAGTGTTGAATCTCTTTTGCTTTCTGCTAACCGGTTCTCTGGGGTGATTCCACCTGAGCTTGGGAACTGTTCTGTGATGCAGCACCTTAGTTTGAGCAGCAATATGTTGACTGGTACCATTCCTGAAGAGCTTTGTAATGCTGCTTCACTGTTGGAGATTGATCTTGATGACAATTTCCTTTCTGGTTCCATTGAAAATGTGTTTGTCAGGTGTAGGAACCTTACTCAGTTGGTTATGATGAACAATCAGATTGTTGGTTCTATACCACAGTACCTCTCAGAGCTTCCCTTGATGGTGCTGGACCTAGACTCCAACAATTTTAGTGGAATGATACCTTCTAGCCTCTGGAATTCTTCATACCTGATGGAGTTCTCTGCTGCTAATAACCGTTTGGAGGGTTCTCTTCCTGTGGAGATTGGGAATGCAATGATACTAGAGAGGCTTGTTCTTAGCAATAATAGATTGACAGGTACTATCCCTAAGGAAATTGGAAGGCTCACAGGTCTTTCTGTTCTTAATCTGAATGGTAATATGCTTGAAGGGAATATTCCAACTGAGCTTTGTGACTGCTTTTCGCTTACCACATTGGACCTTGGAAACAATAGGTTCAATGGCTCTATTCCTGAGAAGCTGGTGGAGCTGAGTCAATTGCAGTGCCTGGTTCTTTCTCACAATGATCTATCTGGGCCTATTCCTGCCAGGAACTCTTCTTATTTCCGTCAGCTTACCATCCCGGATTTGAGCTTTGTTCAACACCTTGGTGTGCTTGATCTTTCCCACAACAGATTGTCTGGCACTATACCTGATGAACTGGGGAGCTGTGTGGTGGTTGTGGATCTATTGATCAGCAACAACATGCTGTCTGGGAGTATTCCAAGATCACTATCACGCCTGACAAATCTTACAACTTTGGATTTGTCTGGCAACTTGTTGTCAGGTTCCATTCCTCCAGAGCTTGGAGATGCCCTCAAGCTCCAGGGTTTATATCTGGGATATAACCAGCTCTCAGGTACCATCCCTGGAAGTTTTGGGAAGTTGAGTAGTTTGGTGAAGCTGAATTTGACAGCAAATAAGTTGTCTGGTCCAATTCCAATTAGTTTTGGGAACATGAAGGGGTTGACACACTTGGACTTGAGCTCCAATCAGCTCATAGGTGAGCTTCCATCCTCTCTATCAGCTGTGCAAAGCCTTGTCGGGCTTTATGTGCAGAAGAATAGGCTTTCTGGCCAAGTAGGGGAGCTCTTCTCAAACTCCATGACATGGAGGATTGAGACAATGAACTTAAGTGATAATTGCTTCAATGGGAACTTGCCGCGATCTTTGGGAAATCTATCTTACTTGACGAATTTAGACCTTCATCGGAATATGTTGACTGGAGAGATTCCTTCAGACCTTGGGAATCTGATGCAACTGGAGTATTTTGATGTTTCAGGTAATGAGTTATCTGGAAATATTCCAGAGAAGTTATGCAGCCTGGTTAATCTGAATTATCTAGATTTGTCTCAAAATATATTGGAAGGACCTATACCCAGCAGTGGTATTTGCCAGAATCTATCCACAGCTAGATTTGTTGGGAACAAAGATCTTTGTGGGCAGATGCTAGGTATAGAGTGTCAGATCAAAGGCATTTGTAGATCAGCATTTTGTAATGCATGGAGGCTGGCTGCGATTGCCATTACCGTCGTATTAATAACTCTAAGCACTGGTTTTGTTCTACATAGATGGATTGGCAGGAGGCAAAATGATCCTGAGGAAATTGAGGAGCGCAAACTTAACAGTTATGTGGATCAAAATCTTTACTTCTTGAGCAGTAGCAGATCGAAAGAACCTCTGAGTATCAATGTAGCAACGTTTGAGCAGCCTCTTCTGAAATTAACCTTGGCCGATATCCTTGAAGCTACTGACAACTTCAGCAAGGCAAACATAATTGGAGATGGAGGTTTTGGAACTGTGTACAAGGCCACTCTACCTGATGGAAAAACAGTTGCAGTGAAGAAACTTAGTGAAGCCAAAACGCAAGGTCATCGAGAGTTCATGGCTGAGATGGAAACCTTGGGCAAGGTGAAGCATCAAAATCTTGTTGCATTGCTTGGATATTGCTCAATGGGTGAGGAGAAACTCCTTGTTTACGAATACATGATAAATGGGAGCTTGGATCTTTGGTTGAGAAACAGAACTGGGGCCCTTGAAGTCCTTGACTGGAACAAACGTTACAAAATTGCAGCTGGTGCAGCTCGAGGATTGGCCTTCCTTCATCATGGTTTCATACCTCACATCATTCACAGGGATGTCAAAGCTAGCAACATTCTTCTCAATGAGGATTTCGAGCCGAAAGTTGCAGACTTCGGACTGGCAAGACTAATCAGTGCTTGTGAGACTCACATCACCACTGATATTGCGGGAACATTTGGTTACATTCCACCAGAGTATGGACAGAGTGGGAGGTCCACAACAAGAGGAGATGTGTACAGTTTTGGTGTCATTTTGCTTGAACTGGTGACTGGAAAAGAGCCAACTGGACCAGATTTCAAAGAGATTGAAGGCGGGAACTTGGTTGGATGGGTGAAACAGAAGAAGAAGAAGGGGCAGGCAGCTGATGTTCTTGATCCAACGGTTCTCGATGCGGATTCAAAGCAGGCGATGCTTCAAATGCTGCAGATTGCGTGTGATTGCCTCTGTGAAAACCCTGTGAACAGGCCTACCATGCTTCAAGTGCACAAGTTACTGAAAGGGATTGGAGGAGAGTAG 3816 0.4602 MAVSCYNLVLCYLLTFCPFCAIADKTNQNPEKISLLSFKNSLHNPHLLSSWQPSTPHCDWFGVTCQLGRVTSLSLPSHYLRGTLSSSLFSLTSLTVLDLEENHFSGELPSKLGELTQLETLRLSSNSFAGKIPPEVGQLTKLRTLDLSGNVLAGELPETIGNLTQLQFLDLSNNLLSGSLPLSLFTGTVSLISLDISNNSFSGEFPPEIGNWRNITALYVGMNKLSGRLPKEIGGLSKLEIFYSPSCSIEGPLPKEMAKLKSLAKLDLSYNPLRCSVPEFIGELESLRILDLVFAQLNGSVPPQLGNCRNLRSVMVSFNSLSGSLPEELSQLPIVTFSAEKNQLHGPLPSWFGKWTSVESLLLSANRFSGVIPPELGNCSVMQHLSLSSNMLTGTIPEELCNAASLLEIDLDDNFLSGSIENVFVRCRNLTQLVMMNNQIVGSIPQYLSELPLMVLDLDSNNFSGMIPSSLWNSSYLMEFSAANNRLEGSLPVEIGNAMILERLVLSNNRLTGTIPKEIGRLTGLSVLNLNGNMLEGNIPTELCDCFSLTTLDLGNNRFNGSIPEKLVELSQLQCLVLSHNDLSGPIPARNSSYFRQLTIPDLSFVQHLGVLDLSHNRLSGTIPDELGSCVVVVDLLISNNMLSGSIPRSLSRLTNLTTLDLSGNLLSGSIPPELGDALKLQGLYLGYNQLSGTIPGSFGKLSSLVKLNLTANKLSGPIPISFGNMKGLTHLDLSSNQLIGELPSSLSAVQSLVGLYVQKNRLSGQVGELFSNSMTWRIETMNLSDNCFNGNLPRSLGNLSYLTNLDLHRNMLTGEIPSDLGNLMQLEYFDVSGNELSGNIPEKLCSLVNLNYLDLSQNILEGPIPSSGICQNLSTARFVGNKDLCGQMLGIECQIKGICRSAFCNAWRLAAIAITVVLITLSTGFVLHRWIGRRQNDPEEIEERKLNSYVDQNLYFLSSSRSKEPLSINVATFEQPLLKLTLADILEATDNFSKANIIGDGGFGTVYKATLPDGKTVAVKKLSEAKTQGHREFMAEMETLGKVKHQNLVALLGYCSMGEEKLLVYEYMINGSLDLWLRNRTGALEVLDWNKRYKIAAGAARGLAFLHHGFIPHIIHRDVKASNILLNEDFEPKVADFGLARLISACETHITTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPDFKEIEGGNLVGWVKQKKKKGQAADVLDPTVLDADSKQAMLQMLQIACDCLCENPVNRPTMLQVHKLLKGIGGE* 1272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0753 1271 SMART LRR_sd22_2 654 669 - -
Dod06g0753 1271 SMART LRR_sd22_2 848 876 - -
Dod06g0753 1271 SMART LRR_sd22_2 139 165 - -
Dod06g0753 1271 SMART LRR_sd22_2 726 745 - -
Dod06g0753 1271 Gene3D Transferase(Phosphotransferase) domain 1 1069 1271 - -
Dod06g0753 1271 ProSitePatterns Protein kinases ATP-binding region signature. 999 1022 IPR017441 GO:0005524
Dod06g0753 1271 Gene3D Ribonuclease Inhibitor 335 595 IPR032675 -
Dod06g0753 1271 Gene3D Ribonuclease Inhibitor 187 334 IPR032675 -
Dod06g0753 1271 Gene3D Ribonuclease Inhibitor 596 897 IPR032675 -
Dod06g0753 1271 Pfam Leucine Rich Repeat 729 748 IPR001611 GO:0005515
Dod06g0753 1271 Pfam Leucine rich repeat N-terminal domain 29 65 IPR013210 -
Dod06g0753 1271 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1115 1127 IPR008271 GO:0004672|GO:0006468
Dod06g0753 1271 ProSiteProfiles Protein kinase domain profile. 993 1265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0753 1271 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 14 126 - -
Dod06g0753 1271 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 780 1268 - -
Dod06g0753 1271 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 94 353 - -
Dod06g0753 1271 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 338 677 - -
Dod06g0753 1271 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 656 768 - -
Dod06g0753 1271 Pfam Protein tyrosine and serine/threonine kinase 996 1265 IPR001245 GO:0004672|GO:0006468
Dod06g0753 1271 SUPERFAMILY L domain-like 602 887 - -
Dod06g0753 1271 PRINTS Leucine-rich repeat signature 609 622 - -
Dod06g0753 1271 PRINTS Leucine-rich repeat signature 654 667 - -
Dod06g0753 1271 SUPERFAMILY RNI-like 72 393 - -
Dod06g0753 1271 SUPERFAMILY Protein kinase-like (PK-like) 974 1265 IPR011009 -
Dod06g0753 1271 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 14 126 - -
Dod06g0753 1271 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 780 1268 - -
Dod06g0753 1271 Gene3D Ribonuclease Inhibitor 28 186 IPR032675 -
Dod06g0753 1271 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 94 353 - -
Dod06g0753 1271 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 338 677 - -
Dod06g0753 1271 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 656 768 - -
Dod06g0753 1271 Pfam Leucine rich repeat 117 176 IPR001611 GO:0005515
Dod06g0753 1271 SUPERFAMILY L domain-like 337 597 - -
Dod06g0753 1271 SMART serkin_6 993 1265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0753 1271 SMART LRR_typ_2 91 115 IPR003591 -
Dod06g0753 1271 SMART LRR_typ_2 139 162 IPR003591 -
Dod06g0753 1271 SMART LRR_typ_2 260 282 IPR003591 -
Dod06g0753 1271 SMART LRR_typ_2 606 630 IPR003591 -
Dod06g0753 1271 SMART LRR_typ_2 654 678 IPR003591 -
Dod06g0753 1271 SMART LRR_typ_2 522 546 IPR003591 -
Dod06g0753 1271 SMART LRR_typ_2 702 725 IPR003591 -
Dod06g0753 1271 SMART LRR_typ_2 848 873 IPR003591 -
Dod06g0753 1271 SMART LRR_typ_2 163 187 IPR003591 -
Dod06g0753 1271 SMART LRR_typ_2 284 308 IPR003591 -
Dod06g0753 1271 SMART LRR_typ_2 800 824 IPR003591 -
Dod06g0753 1271 SMART LRR_typ_2 726 750 IPR003591 -
Dod06g0753 1271 Gene3D Phosphorylase Kinase; domain 1 955 1068 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0753 Dod-Chr6 9209099 9213139 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0753 31 1268 Receptor kinase-like Gene Family AT5G07280 60.289 0.0 1433
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Dod06g0753 PK_Tyr_Ser-Thr 3.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0753 - - aip:107618864 2185.22