Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0739 ATGATTTCAGGTCGGTGTGCAGCTTGCAAGAATCAGAGAAGAAAGTGCCCTTCGGATTGCATTTTCTCTCCTTATTTCCCTCCCAATGATCCTCAAAGGTATGCTTGCGTTCACAGAATATTTGGTGGCAGCAATGTTGGAAAAATGCTTCAGCAAATTCCACCCTATGCCCGAGCACAAGCAGCAGATAGTTTATATTTTGAAGCACAGTGTCGTGTTCAAGACCCCATTTATGGTTGCTTTGGAATTATCTCTCAACTTGTTCAACAAATGCATTACGCAGAATTCGAGTTAGCCAAAGTCCAGGCTCACATTAACATTCTTAGGTCCCACTCCCAAATCCCACAAGTTGGAGATGGGTCAAATTTCAATCTTCATATATTTAATAATTTCATGTGTATTTTGTTTTATGCCACGAGATTGTCATCACTGGAGATTTTGATATGTGACAAAGTTAGCAACATGACTGAAATGGTGCACTAG 483 0.4037 MISGRCAACKNQRRKCPSDCIFSPYFPPNDPQRYACVHRIFGGSNVGKMLQQIPPYARAQAADSLYFEAQCRVQDPIYGCFGIISQLVQQMHYAEFELAKVQAHINILRSHSQIPQVGDGSNFNLHIFNNFMCILFYATRLSSLEILICDKVSNMTEMVH* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0739 160 ProSiteProfiles LOB domain profile. 4 105 IPR004883 -
Dod06g0739 160 PANTHER LOB DOMAIN-CONTAINING PROTEIN 23-RELATED 1 113 - -
Dod06g0739 160 Pfam Lateral organ boundaries (LOB) domain 5 102 IPR004883 -
Dod06g0739 160 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0739 Dod-Chr6 8998378 8999489 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0739 1 119 AS2 family AT3G26660 57.983 3.59e-48 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Dod06g0739 LOB 9.2e-36 No_clan